Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 RARRES2P6-201ENST00000567333 442 ntBASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCA3PQ9Y6N3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCA3PQ9Y6N3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CLCA3PQ9Y6N3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 AC097381.1-201ENST00000429019 1296 ntBASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 AC123595.1-201ENST00000440769 1046 ntBASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLCA3PQ9Y6N3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 LINC02228-203ENST00000641970 1355 ntBASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 AL034346.1-201ENST00000568244 1277 ntBASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 MIR6821-201ENST00000617625 74 ntBASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 AP004607.7-201ENST00000527152 1677 ntBASIC20.13■□□□□ 0.81
CLCA3PQ9Y6N3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
CLCA3PQ9Y6N3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCA3PQ9Y6N3 AC080038.3-201ENST00000623346 1952 ntBASIC20.12■□□□□ 0.81
CLCA3PQ9Y6N3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCA3PQ9Y6N3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 AC009237.3-201ENST00000393279 1427 ntBASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 AC026271.2-201ENST00000428091 497 ntBASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCA3PQ9Y6N3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CLCA3PQ9Y6N3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.1■□□□□ 0.81
CLCA3PQ9Y6N3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCA3PQ9Y6N3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CLCA3PQ9Y6N3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.1■□□□□ 0.81
CLCA3PQ9Y6N3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.1■□□□□ 0.81
CLCA3PQ9Y6N3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.1■□□□□ 0.81
CLCA3PQ9Y6N3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCA3PQ9Y6N3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.1■□□□□ 0.81
CLCA3PQ9Y6N3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.1■□□□□ 0.81
CLCA3PQ9Y6N3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCA3PQ9Y6N3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCA3PQ9Y6N3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms