Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TSSC4Q9Y5U2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TSSC4Q9Y5U2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 SLC25A24-204ENST00000569674 2357 ntBASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 AC073111.5-205ENST00000641717 521 ntBASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TSSC4Q9Y5U2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 AC026185.1-201ENST00000445748 174 ntBASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 AP004607.7-201ENST00000527152 1677 ntBASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.68■□□□□ 0.26
TSSC4Q9Y5U2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 CDCA4P2-201ENST00000441182 718 ntBASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 AC104187.1-201ENST00000607510 612 ntBASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 AC011767.1-201ENST00000617410 1153 ntBASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TSSC4Q9Y5U2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSSC4Q9Y5U2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TSSC4Q9Y5U2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSSC4Q9Y5U2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.66■□□□□ 0.26
TSSC4Q9Y5U2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TSSC4Q9Y5U2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.66■□□□□ 0.26
TSSC4Q9Y5U2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.66■□□□□ 0.26
TSSC4Q9Y5U2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.66■□□□□ 0.26
TSSC4Q9Y5U2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSSC4Q9Y5U2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TSSC4Q9Y5U2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSSC4Q9Y5U2 RNF165-205ENST00000588679 2904 ntBASIC16.66■□□□□ 0.26
TSSC4Q9Y5U2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSSC4Q9Y5U2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms