Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HRH3Q9Y5N1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 AC233723.2-201ENST00000623798 2106 ntBASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 KRT18P61-201ENST00000585825 1298 ntBASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 TPRG1LP1-201ENST00000598702 760 ntBASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HRH3Q9Y5N1 SLC25A24-204ENST00000569674 2357 ntBASIC19.71■□□□□ 0.75
HRH3Q9Y5N1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HRH3Q9Y5N1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HRH3Q9Y5N1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.71■□□□□ 0.75
HRH3Q9Y5N1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.71■□□□□ 0.75
HRH3Q9Y5N1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HRH3Q9Y5N1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HRH3Q9Y5N1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HRH3Q9Y5N1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HRH3Q9Y5N1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HRH3Q9Y5N1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.71■□□□□ 0.75
HRH3Q9Y5N1 ESRRAP2-201ENST00000418437 1549 ntBASIC19.71■□□□□ 0.75
HRH3Q9Y5N1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HRH3Q9Y5N1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HRH3Q9Y5N1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HRH3Q9Y5N1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.68■□□□□ 0.74
HRH3Q9Y5N1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HRH3Q9Y5N1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HRH3Q9Y5N1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HRH3Q9Y5N1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.68■□□□□ 0.74
HRH3Q9Y5N1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.68■□□□□ 0.74
HRH3Q9Y5N1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HRH3Q9Y5N1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HRH3Q9Y5N1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HRH3Q9Y5N1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms