Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB1Q9Y5F3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB1Q9Y5F3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB1Q9Y5F3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB1Q9Y5F3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHB1Q9Y5F3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB1Q9Y5F3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB1Q9Y5F3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB1Q9Y5F3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 HLA-L-209ENST00000420110 1011 ntBASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB1Q9Y5F3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB1Q9Y5F3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB1Q9Y5F3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB1Q9Y5F3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.39■■□□□ 1.02
PCDHB1Q9Y5F3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB1Q9Y5F3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB1Q9Y5F3 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.39■■□□□ 1.01
PCDHB1Q9Y5F3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB1Q9Y5F3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHB1Q9Y5F3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHB1Q9Y5F3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB1Q9Y5F3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB1Q9Y5F3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB1Q9Y5F3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB1Q9Y5F3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB1Q9Y5F3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB1Q9Y5F3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB1Q9Y5F3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 LINC00565-201ENST00000562710 2331 ntBASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHB1Q9Y5F3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHB1Q9Y5F3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms