Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 AC079140.4-201ENST00000507448 529 ntBASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPHK1Q9NYA1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK1Q9NYA1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 AP004607.4-201ENST00000530158 1459 ntBASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 AC004854.2-201ENST00000608450 1441 ntBASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 AC026471.6-201ENST00000622954 1905 ntBASIC20.65■□□□□ 0.9
SPHK1Q9NYA1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPHK1Q9NYA1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SPHK1Q9NYA1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 ECEL1P1-201ENST00000373592 1742 ntBASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SPHK1Q9NYA1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK1Q9NYA1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SPHK1Q9NYA1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.62■□□□□ 0.89
SPHK1Q9NYA1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK1Q9NYA1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK1Q9NYA1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK1Q9NYA1 AC104564.3-201ENST00000582367 638 ntBASIC20.62■□□□□ 0.89
SPHK1Q9NYA1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.62■□□□□ 0.89
SPHK1Q9NYA1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK1Q9NYA1 AL117328.2-201ENST00000624617 1940 ntBASIC20.62■□□□□ 0.89
SPHK1Q9NYA1 FAM99A-202ENST00000538190 1989 ntBASIC20.61■□□□□ 0.89
SPHK1Q9NYA1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.61■□□□□ 0.89
SPHK1Q9NYA1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPHK1Q9NYA1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPHK1Q9NYA1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.61■□□□□ 0.89
SPHK1Q9NYA1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPHK1Q9NYA1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.61■□□□□ 0.89
SPHK1Q9NYA1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.61■□□□□ 0.89
SPHK1Q9NYA1 AC092666.2-201ENST00000613287 246 ntBASIC20.61■□□□□ 0.89
SPHK1Q9NYA1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPHK1Q9NYA1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms