Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.49■□□□□ 0.71
CLN6Q9NWW5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLN6Q9NWW5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLN6Q9NWW5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLN6Q9NWW5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLN6Q9NWW5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLN6Q9NWW5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.48■□□□□ 0.71
CLN6Q9NWW5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CLN6Q9NWW5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CLN6Q9NWW5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLN6Q9NWW5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.48■□□□□ 0.71
CLN6Q9NWW5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CLN6Q9NWW5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.48■□□□□ 0.71
CLN6Q9NWW5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.48■□□□□ 0.71
CLN6Q9NWW5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLN6Q9NWW5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLN6Q9NWW5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 AC021242.3-201ENST00000607598 1377 ntBASIC19.47■□□□□ 0.71
CLN6Q9NWW5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLN6Q9NWW5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 AC092667.1-201ENST00000434301 2586 ntBASIC19.46■□□□□ 0.71
CLN6Q9NWW5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLN6Q9NWW5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLN6Q9NWW5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CLN6Q9NWW5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 BX664725.1-201ENST00000438252 379 ntBASIC19.43■□□□□ 0.7
CLN6Q9NWW5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLN6Q9NWW5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLN6Q9NWW5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms