Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAF3Q9NRP4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 AC005224.4-201ENST00000583262 1652 ntBASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.59■□□□□ 0.73
SDHAF3Q9NRP4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.58■□□□□ 0.73
SDHAF3Q9NRP4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.58■□□□□ 0.73
SDHAF3Q9NRP4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SDHAF3Q9NRP4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.58■□□□□ 0.73
SDHAF3Q9NRP4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SDHAF3Q9NRP4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SDHAF3Q9NRP4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 TPRG1LP1-201ENST00000598702 760 ntBASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDHAF3Q9NRP4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAF3Q9NRP4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 AC097381.1-201ENST00000429019 1296 ntBASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 MIR6821-201ENST00000617625 74 ntBASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.56■□□□□ 0.72
SDHAF3Q9NRP4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 AP006587.3-201ENST00000525742 1516 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms