Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3AQ9NNX9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.95■□□□□ 0.78
VCX3AQ9NNX9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 FEM1AP1-201ENST00000431297 1995 ntBASIC19.94■□□□□ 0.78
VCX3AQ9NNX9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
VCX3AQ9NNX9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VCX3AQ9NNX9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
VCX3AQ9NNX9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCX3AQ9NNX9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCX3AQ9NNX9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCX3AQ9NNX9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCX3AQ9NNX9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
VCX3AQ9NNX9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCX3AQ9NNX9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCX3AQ9NNX9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.93■□□□□ 0.78
VCX3AQ9NNX9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCX3AQ9NNX9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 AC093536.1-201ENST00000569153 554 ntBASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 BX323043.1-201ENST00000641006 1765 ntBASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 AC018445.3-201ENST00000624177 1945 ntBASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VCX3AQ9NNX9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
VCX3AQ9NNX9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3AQ9NNX9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3AQ9NNX9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.91■□□□□ 0.78
VCX3AQ9NNX9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3AQ9NNX9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3AQ9NNX9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3AQ9NNX9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3AQ9NNX9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
VCX3AQ9NNX9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3AQ9NNX9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.91■□□□□ 0.78
VCX3AQ9NNX9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3AQ9NNX9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 FEM1AP4-201ENST00000443167 1987 ntBASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3AQ9NNX9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
VCX3AQ9NNX9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
VCX3AQ9NNX9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VCX3AQ9NNX9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms