Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 RARRES2P6-201ENST00000567333 442 ntBASIC18.35■□□□□ 0.53
MSL2Q9HCI7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSL2Q9HCI7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MSL2Q9HCI7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MSL2Q9HCI7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MSL2Q9HCI7 EP400NL-214ENST00000641289 2402 ntBASIC18.34■□□□□ 0.53
MSL2Q9HCI7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MSL2Q9HCI7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.34■□□□□ 0.53
MSL2Q9HCI7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.34■□□□□ 0.53
MSL2Q9HCI7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MSL2Q9HCI7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSL2Q9HCI7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSL2Q9HCI7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.34■□□□□ 0.53
MSL2Q9HCI7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.33■□□□□ 0.53
MSL2Q9HCI7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.33■□□□□ 0.53
MSL2Q9HCI7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
MSL2Q9HCI7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MSL2Q9HCI7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MSL2Q9HCI7 AC092053.2-201ENST00000640557 1818 ntBASIC18.33■□□□□ 0.53
MSL2Q9HCI7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.33■□□□□ 0.53
MSL2Q9HCI7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
MSL2Q9HCI7 ECEL1P1-201ENST00000373592 1742 ntBASIC18.33■□□□□ 0.52
MSL2Q9HCI7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MSL2Q9HCI7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
MSL2Q9HCI7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
MSL2Q9HCI7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
MSL2Q9HCI7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
MSL2Q9HCI7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MSL2Q9HCI7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MSL2Q9HCI7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MSL2Q9HCI7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.33■□□□□ 0.52
MSL2Q9HCI7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
MSL2Q9HCI7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
MSL2Q9HCI7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.33■□□□□ 0.52
MSL2Q9HCI7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 LINC02228-203ENST00000641970 1355 ntBASIC18.32■□□□□ 0.52
MSL2Q9HCI7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 AC026271.2-201ENST00000428091 497 ntBASIC18.32■□□□□ 0.52
MSL2Q9HCI7 AC097381.1-201ENST00000429019 1296 ntBASIC18.32■□□□□ 0.52
MSL2Q9HCI7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 AL034346.1-201ENST00000568244 1277 ntBASIC18.32■□□□□ 0.52
MSL2Q9HCI7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 TPRG1LP1-201ENST00000598702 760 ntBASIC18.32■□□□□ 0.52
MSL2Q9HCI7 AC087623.3-201ENST00000607047 1098 ntBASIC18.32■□□□□ 0.52
MSL2Q9HCI7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MSL2Q9HCI7 AC009237.3-201ENST00000393279 1427 ntBASIC18.32■□□□□ 0.52
MSL2Q9HCI7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 AC123595.1-201ENST00000440769 1046 ntBASIC18.31■□□□□ 0.52
MSL2Q9HCI7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 MIR6821-201ENST00000617625 74 ntBASIC18.31■□□□□ 0.52
MSL2Q9HCI7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSL2Q9HCI7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MSL2Q9HCI7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms