Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE5Q9HCH3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE5Q9HCH3 AC093827.2-201ENST00000512654 315 ntBASIC20.62■□□□□ 0.89
CPNE5Q9HCH3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE5Q9HCH3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE5Q9HCH3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE5Q9HCH3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE5Q9HCH3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.62■□□□□ 0.89
CPNE5Q9HCH3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE5Q9HCH3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE5Q9HCH3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE5Q9HCH3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 AL050303.2-201ENST00000619798 666 ntBASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE5Q9HCH3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 TSPY6P-201ENST00000448518 926 ntBASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE5Q9HCH3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 FAM201B-201ENST00000458407 597 ntBASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 AL138781.1-201ENST00000566567 1274 ntBASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE5Q9HCH3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 AC007375.3-201ENST00000600936 2314 ntBASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 MFSD11-216ENST00000590393 1141 ntBASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE5Q9HCH3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE5Q9HCH3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE5Q9HCH3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE5Q9HCH3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE5Q9HCH3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE5Q9HCH3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE5Q9HCH3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 LINC00526-201ENST00000581067 1875 ntBASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CPNE5Q9HCH3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms