Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42EP4Q9H3Q1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.79■■□□□ 1.08
CDC42EP4Q9H3Q1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42EP4Q9H3Q1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42EP4Q9H3Q1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 AL451085.2-201ENST00000605085 799 ntBASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 AC010997.5-201ENST00000609182 354 ntBASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42EP4Q9H3Q1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42EP4Q9H3Q1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42EP4Q9H3Q1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42EP4Q9H3Q1 AC133637.1-201ENST00000624115 1537 ntBASIC21.77■■□□□ 1.08
CDC42EP4Q9H3Q1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.77■■□□□ 1.08
CDC42EP4Q9H3Q1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42EP4Q9H3Q1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CDC42EP4Q9H3Q1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDC42EP4Q9H3Q1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 LINC01006-201ENST00000333319 2292 ntBASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 Z92544.1-202ENST00000571933 1220 ntBASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 MIR4787-201ENST00000607364 84 ntBASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.76■■□□□ 1.07
CDC42EP4Q9H3Q1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42EP4Q9H3Q1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42EP4Q9H3Q1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42EP4Q9H3Q1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42EP4Q9H3Q1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42EP4Q9H3Q1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
CDC42EP4Q9H3Q1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42EP4Q9H3Q1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.75■■□□□ 1.07
CDC42EP4Q9H3Q1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42EP4Q9H3Q1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.75■■□□□ 1.07
CDC42EP4Q9H3Q1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDC42EP4Q9H3Q1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
CDC42EP4Q9H3Q1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.74■■□□□ 1.07
CDC42EP4Q9H3Q1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.74■■□□□ 1.07
CDC42EP4Q9H3Q1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42EP4Q9H3Q1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.74■■□□□ 1.07
CDC42EP4Q9H3Q1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42EP4Q9H3Q1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42EP4Q9H3Q1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
CDC42EP4Q9H3Q1 OXCT2P1-201ENST00000447263 1535 ntBASIC21.74■■□□□ 1.07
CDC42EP4Q9H3Q1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.74■■□□□ 1.07
CDC42EP4Q9H3Q1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42EP4Q9H3Q1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42EP4Q9H3Q1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42EP4Q9H3Q1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CDC42EP4Q9H3Q1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42EP4Q9H3Q1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.73■■□□□ 1.07
CDC42EP4Q9H3Q1 AL117332.1-201ENST00000622628 974 ntBASIC21.73■■□□□ 1.07
CDC42EP4Q9H3Q1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.73■■□□□ 1.07
CDC42EP4Q9H3Q1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.73■■□□□ 1.07
CDC42EP4Q9H3Q1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42EP4Q9H3Q1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42EP4Q9H3Q1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42EP4Q9H3Q1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 AC006455.2-201ENST00000429931 906 ntBASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 AC241377.3-202ENST00000626088 1088 ntBASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 AC241585.3-202ENST00000628937 1088 ntBASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 AC245100.8-202ENST00000629247 1058 ntBASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CDC42EP4Q9H3Q1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CDC42EP4Q9H3Q1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CDC42EP4Q9H3Q1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms