Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 AC242852.2-201ENST00000615738 1807 ntBASIC22.86■■□□□ 1.25
SNX25Q9H3E2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 AC055733.4-201ENST00000638462 1354 ntBASIC22.86■■□□□ 1.25
SNX25Q9H3E2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SNX25Q9H3E2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SNX25Q9H3E2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.85■■□□□ 1.25
SNX25Q9H3E2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.85■■□□□ 1.25
SNX25Q9H3E2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.85■■□□□ 1.25
SNX25Q9H3E2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.85■■□□□ 1.25
SNX25Q9H3E2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SNX25Q9H3E2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SNX25Q9H3E2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 AP006587.3-201ENST00000525742 1516 ntBASIC22.84■■□□□ 1.25
SNX25Q9H3E2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
SNX25Q9H3E2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.83■■□□□ 1.25
SNX25Q9H3E2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SNX25Q9H3E2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SNX25Q9H3E2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SNX25Q9H3E2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SNX25Q9H3E2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SNX25Q9H3E2 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.83■■□□□ 1.25
SNX25Q9H3E2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
SNX25Q9H3E2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
SNX25Q9H3E2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SNX25Q9H3E2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SNX25Q9H3E2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.83■■□□□ 1.24
SNX25Q9H3E2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNX25Q9H3E2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SNX25Q9H3E2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNX25Q9H3E2 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.82■■□□□ 1.24
SNX25Q9H3E2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SNX25Q9H3E2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.82■■□□□ 1.24
SNX25Q9H3E2 AC104564.3-201ENST00000582367 638 ntBASIC22.82■■□□□ 1.24
SNX25Q9H3E2 AC133561.1-201ENST00000568600 2415 ntBASIC22.82■■□□□ 1.24
SNX25Q9H3E2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.82■■□□□ 1.24
SNX25Q9H3E2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNX25Q9H3E2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SNX25Q9H3E2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 AC004854.2-201ENST00000608450 1441 ntBASIC22.8■■□□□ 1.24
SNX25Q9H3E2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNX25Q9H3E2 KRT87P-202ENST00000534226 1464 ntBASIC22.79■■□□□ 1.24
SNX25Q9H3E2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.79■■□□□ 1.24
SNX25Q9H3E2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SNX25Q9H3E2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SNX25Q9H3E2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.79■■□□□ 1.24
SNX25Q9H3E2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.79■■□□□ 1.24
SNX25Q9H3E2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SNX25Q9H3E2 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.79■■□□□ 1.24
SNX25Q9H3E2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms