Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX47Q9H0S4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX47Q9H0S4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX47Q9H0S4 AC104564.3-201ENST00000582367 638 ntBASIC22.27■■□□□ 1.16
DDX47Q9H0S4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX47Q9H0S4 AL117332.1-201ENST00000622628 974 ntBASIC22.27■■□□□ 1.16
DDX47Q9H0S4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX47Q9H0S4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
DDX47Q9H0S4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX47Q9H0S4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX47Q9H0S4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.15
DDX47Q9H0S4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX47Q9H0S4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX47Q9H0S4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
DDX47Q9H0S4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX47Q9H0S4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX47Q9H0S4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.26■■□□□ 1.15
DDX47Q9H0S4 AC239859.2-201ENST00000444165 318 ntBASIC22.26■■□□□ 1.15
DDX47Q9H0S4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX47Q9H0S4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX47Q9H0S4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX47Q9H0S4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX47Q9H0S4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.25■■□□□ 1.15
DDX47Q9H0S4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX47Q9H0S4 AC006455.2-201ENST00000429931 906 ntBASIC22.25■■□□□ 1.15
DDX47Q9H0S4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX47Q9H0S4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX47Q9H0S4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX47Q9H0S4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX47Q9H0S4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.25■■□□□ 1.15
DDX47Q9H0S4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DDX47Q9H0S4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.24■■□□□ 1.15
DDX47Q9H0S4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
DDX47Q9H0S4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX47Q9H0S4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX47Q9H0S4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX47Q9H0S4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX47Q9H0S4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
DDX47Q9H0S4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
DDX47Q9H0S4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 LINC01521-201ENST00000504184 1943 ntBASIC22.23■■□□□ 1.15
DDX47Q9H0S4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 pRNA.6-201ENST00000610482 90 ntBASIC22.23■■□□□ 1.15
DDX47Q9H0S4 pRNA.5-201ENST00000612139 90 ntBASIC22.23■■□□□ 1.15
DDX47Q9H0S4 pRNA.11-201ENST00000618423 90 ntBASIC22.23■■□□□ 1.15
DDX47Q9H0S4 pRNA.13-201ENST00000619112 90 ntBASIC22.23■■□□□ 1.15
DDX47Q9H0S4 AC241377.3-202ENST00000626088 1088 ntBASIC22.23■■□□□ 1.15
DDX47Q9H0S4 AC241585.3-202ENST00000628937 1088 ntBASIC22.23■■□□□ 1.15
DDX47Q9H0S4 AC245100.8-202ENST00000629247 1058 ntBASIC22.23■■□□□ 1.15
DDX47Q9H0S4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
DDX47Q9H0S4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX47Q9H0S4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
DDX47Q9H0S4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms