Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 AC092337.1-201ENST00000568699 1129 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 RN7SL850P-201ENST00000579959 291 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 AC010980.1-201ENST00000587192 1142 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 AC006557.1-201ENST00000591211 1085 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 AC009812.1-201ENST00000605948 1059 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 RNU4-5P-201ENST00000607255 135 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 AC009974.1-201ENST00000608881 455 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 BHLHE23-202ENST00000612929 1109 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 AP001350.2-201ENST00000625104 1094 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 ZNF663P-202ENST00000641770 1131 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 LINC00852-201ENST00000475197 1328 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 LIAS-202ENST00000340169 1485 ntTSL 5 BASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 SMPD5-203ENST00000639008 1464 ntBASIC4.43□□□□□ -1.7
KRTAP4-4Q9BYR3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 RN7SL832P-201ENST00000607781 1756 ntBASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 MTND4P21-201ENST00000453886 1357 ntBASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AC107058.1-201ENST00000513297 1384 ntBASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 LYG1-201ENST00000308528 990 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AL512637.2-201ENST00000431287 1256 ntBASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AC074367.1-201ENST00000438685 1125 ntBASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 DUX4L9-201ENST00000449051 1259 ntBASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 ECEL1P2-201ENST00000461596 1295 ntBASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AADACP1-203ENST00000471766 707 ntTSL 3 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.42□□□□□ -1.7
KRTAP4-4Q9BYR3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms