Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 AC126544.1-201ENST00000580842 1059 ntBASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 AC233992.3-201ENST00000607491 485 ntBASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
YIPF4Q9BSR8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
YIPF4Q9BSR8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
YIPF4Q9BSR8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
YIPF4Q9BSR8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
YIPF4Q9BSR8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.08■□□□□ 0.81
YIPF4Q9BSR8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
YIPF4Q9BSR8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
YIPF4Q9BSR8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.08■□□□□ 0.8
YIPF4Q9BSR8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
YIPF4Q9BSR8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
YIPF4Q9BSR8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
YIPF4Q9BSR8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
YIPF4Q9BSR8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.08■□□□□ 0.8
YIPF4Q9BSR8 AL137060.1-201ENST00000618151 2648 ntBASIC20.07■□□□□ 0.8
YIPF4Q9BSR8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
YIPF4Q9BSR8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
YIPF4Q9BSR8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
YIPF4Q9BSR8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
YIPF4Q9BSR8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
YIPF4Q9BSR8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.07■□□□□ 0.8
YIPF4Q9BSR8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
YIPF4Q9BSR8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
YIPF4Q9BSR8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
YIPF4Q9BSR8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.07■□□□□ 0.8
YIPF4Q9BSR8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 ZNRF2P3-201ENST00000424200 374 ntBASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.06■□□□□ 0.8
YIPF4Q9BSR8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 AL355001.2-201ENST00000620617 1191 ntBASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF4Q9BSR8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 EDA-201ENST00000338901 1233 ntBASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 AC099791.1-201ENST00000416440 715 ntBASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF4Q9BSR8 AP004607.7-201ENST00000527152 1677 ntBASIC20.03■□□□□ 0.8
YIPF4Q9BSR8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF4Q9BSR8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF4Q9BSR8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.03■□□□□ 0.8
YIPF4Q9BSR8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF4Q9BSR8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.03■□□□□ 0.8
YIPF4Q9BSR8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.03■□□□□ 0.8
YIPF4Q9BSR8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.03■□□□□ 0.8
YIPF4Q9BSR8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.03■□□□□ 0.8
YIPF4Q9BSR8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms