Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AL031602.1-201ENST00000633169 911 ntBASIC16.17■□□□□ 0.18
VGLL1Q99990 AC133637.1-201ENST00000624115 1537 ntBASIC16.17■□□□□ 0.18
VGLL1Q99990 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VGLL1Q99990 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VGLL1Q99990 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VGLL1Q99990 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VGLL1Q99990 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VGLL1Q99990 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VGLL1Q99990 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VGLL1Q99990 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VGLL1Q99990 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VGLL1Q99990 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.16■□□□□ 0.18
VGLL1Q99990 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.16■□□□□ 0.18
VGLL1Q99990 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
VGLL1Q99990 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VGLL1Q99990 AC006455.2-201ENST00000429931 906 ntBASIC16.16■□□□□ 0.18
VGLL1Q99990 UNC93B8-201ENST00000511903 705 ntBASIC16.16■□□□□ 0.18
VGLL1Q99990 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VGLL1Q99990 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.16■□□□□ 0.18
VGLL1Q99990 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.16■□□□□ 0.18
VGLL1Q99990 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VGLL1Q99990 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VGLL1Q99990 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.16■□□□□ 0.18
VGLL1Q99990 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
VGLL1Q99990 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
VGLL1Q99990 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.15■□□□□ 0.18
VGLL1Q99990 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
VGLL1Q99990 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL1Q99990 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL1Q99990 FEM1AP4-201ENST00000443167 1987 ntBASIC16.15■□□□□ 0.18
VGLL1Q99990 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.15■□□□□ 0.18
VGLL1Q99990 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.15■□□□□ 0.18
VGLL1Q99990 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
VGLL1Q99990 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL1Q99990 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL1Q99990 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL1Q99990 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.15■□□□□ 0.18
VGLL1Q99990 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL1Q99990 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.15■□□□□ 0.18
VGLL1Q99990 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.15■□□□□ 0.18
VGLL1Q99990 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.15■□□□□ 0.18
VGLL1Q99990 pRNA.6-201ENST00000610482 90 ntBASIC16.15■□□□□ 0.18
VGLL1Q99990 pRNA.5-201ENST00000612139 90 ntBASIC16.15■□□□□ 0.18
VGLL1Q99990 pRNA.11-201ENST00000618423 90 ntBASIC16.15■□□□□ 0.18
VGLL1Q99990 pRNA.13-201ENST00000619112 90 ntBASIC16.15■□□□□ 0.18
VGLL1Q99990 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL1Q99990 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL1Q99990 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
VGLL1Q99990 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL1Q99990 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL1Q99990 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.15■□□□□ 0.18
VGLL1Q99990 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
VGLL1Q99990 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL1Q99990 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
VGLL1Q99990 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL1Q99990 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL1Q99990 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL1Q99990 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.14■□□□□ 0.17
VGLL1Q99990 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.14■□□□□ 0.17
VGLL1Q99990 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.14■□□□□ 0.17
VGLL1Q99990 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.14■□□□□ 0.17
VGLL1Q99990 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.14■□□□□ 0.17
VGLL1Q99990 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VGLL1Q99990 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL1Q99990 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL1Q99990 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.14■□□□□ 0.17
VGLL1Q99990 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL1Q99990 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 OR7E47P-201ENST00000546390 1422 ntBASIC16.13■□□□□ 0.17
VGLL1Q99990 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
VGLL1Q99990 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VGLL1Q99990 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.13■□□□□ 0.17
VGLL1Q99990 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.13■□□□□ 0.17
VGLL1Q99990 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
VGLL1Q99990 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.13■□□□□ 0.17
VGLL1Q99990 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VGLL1Q99990 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
VGLL1Q99990 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
VGLL1Q99990 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.13■□□□□ 0.17
VGLL1Q99990 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.13■□□□□ 0.17
VGLL1Q99990 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL1Q99990 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.13■□□□□ 0.17
VGLL1Q99990 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.13■□□□□ 0.17
VGLL1Q99990 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VGLL1Q99990 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VGLL1Q99990 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VGLL1Q99990 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.12■□□□□ 0.17
VGLL1Q99990 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
VGLL1Q99990 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms