Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.5■□□□□ 0.71
NPAS1Q99742 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS1Q99742 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.5■□□□□ 0.71
NPAS1Q99742 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS1Q99742 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS1Q99742 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS1Q99742 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS1Q99742 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.5■□□□□ 0.71
NPAS1Q99742 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS1Q99742 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS1Q99742 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NPAS1Q99742 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS1Q99742 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
NPAS1Q99742 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS1Q99742 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS1Q99742 BX005040.4-201ENST00000637145 1518 ntBASIC19.49■□□□□ 0.71
NPAS1Q99742 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS1Q99742 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NPAS1Q99742 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
NPAS1Q99742 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS1Q99742 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS1Q99742 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS1Q99742 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS1Q99742 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS1Q99742 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NPAS1Q99742 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS1Q99742 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.48■□□□□ 0.71
NPAS1Q99742 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS1Q99742 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS1Q99742 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS1Q99742 AC027612.3-201ENST00000413684 1047 ntBASIC19.48■□□□□ 0.71
NPAS1Q99742 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS1Q99742 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.48■□□□□ 0.71
NPAS1Q99742 TPRG1LP1-201ENST00000598702 760 ntBASIC19.48■□□□□ 0.71
NPAS1Q99742 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NPAS1Q99742 FAM99A-202ENST00000538190 1989 ntBASIC19.48■□□□□ 0.71
NPAS1Q99742 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS1Q99742 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.48■□□□□ 0.71
NPAS1Q99742 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS1Q99742 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS1Q99742 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS1Q99742 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NPAS1Q99742 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS1Q99742 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS1Q99742 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.47■□□□□ 0.71
NPAS1Q99742 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS1Q99742 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS1Q99742 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS1Q99742 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS1Q99742 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS1Q99742 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NPAS1Q99742 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NPAS1Q99742 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.46■□□□□ 0.71
NPAS1Q99742 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS1Q99742 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.46■□□□□ 0.71
NPAS1Q99742 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NPAS1Q99742 AC026271.2-201ENST00000428091 497 ntBASIC19.46■□□□□ 0.71
NPAS1Q99742 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS1Q99742 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS1Q99742 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS1Q99742 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS1Q99742 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS1Q99742 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS1Q99742 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS1Q99742 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS1Q99742 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.45■□□□□ 0.7
NPAS1Q99742 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.45■□□□□ 0.7
NPAS1Q99742 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.45■□□□□ 0.7
NPAS1Q99742 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS1Q99742 AL121603.2-201ENST00000557373 2117 ntBASIC19.45■□□□□ 0.7
NPAS1Q99742 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS1Q99742 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS1Q99742 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NPAS1Q99742 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS1Q99742 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS1Q99742 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
NPAS1Q99742 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NPAS1Q99742 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.45■□□□□ 0.7
NPAS1Q99742 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.45■□□□□ 0.7
NPAS1Q99742 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
NPAS1Q99742 C11orf96-202ENST00000528572 1834 ntBASIC19.44■□□□□ 0.7
NPAS1Q99742 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS1Q99742 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NPAS1Q99742 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NPAS1Q99742 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS1Q99742 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS1Q99742 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS1Q99742 MIR935-201ENST00000401179 91 ntBASIC19.44■□□□□ 0.7
NPAS1Q99742 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS1Q99742 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.44■□□□□ 0.7
NPAS1Q99742 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS1Q99742 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.44■□□□□ 0.7
NPAS1Q99742 AC087623.3-201ENST00000607047 1098 ntBASIC19.44■□□□□ 0.7
NPAS1Q99742 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS1Q99742 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NPAS1Q99742 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS1Q99742 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS1Q99742 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.43■□□□□ 0.7
NPAS1Q99742 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS1Q99742 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms