Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
BBS4Q96RK4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.27■□□□□ 0.83
BBS4Q96RK4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.26■□□□□ 0.83
BBS4Q96RK4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
BBS4Q96RK4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.26■□□□□ 0.83
BBS4Q96RK4 AC099791.1-201ENST00000416440 715 ntBASIC20.26■□□□□ 0.83
BBS4Q96RK4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.26■□□□□ 0.83
BBS4Q96RK4 AC027682.1-201ENST00000562846 899 ntBASIC20.26■□□□□ 0.83
BBS4Q96RK4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.26■□□□□ 0.83
BBS4Q96RK4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BBS4Q96RK4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BBS4Q96RK4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BBS4Q96RK4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
BBS4Q96RK4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BBS4Q96RK4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BBS4Q96RK4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BBS4Q96RK4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BBS4Q96RK4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.25■□□□□ 0.83
BBS4Q96RK4 AC010542.4-201ENST00000563151 1910 ntBASIC20.25■□□□□ 0.83
BBS4Q96RK4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.25■□□□□ 0.83
BBS4Q96RK4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
BBS4Q96RK4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BBS4Q96RK4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BBS4Q96RK4 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.25■□□□□ 0.83
BBS4Q96RK4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.25■□□□□ 0.83
BBS4Q96RK4 AL034346.1-201ENST00000568244 1277 ntBASIC20.25■□□□□ 0.83
BBS4Q96RK4 AL355001.2-201ENST00000620617 1191 ntBASIC20.25■□□□□ 0.83
BBS4Q96RK4 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.25■□□□□ 0.83
BBS4Q96RK4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BBS4Q96RK4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BBS4Q96RK4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BBS4Q96RK4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
BBS4Q96RK4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
BBS4Q96RK4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.24■□□□□ 0.83
BBS4Q96RK4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.24■□□□□ 0.83
BBS4Q96RK4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.24■□□□□ 0.83
BBS4Q96RK4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
BBS4Q96RK4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BBS4Q96RK4 AP004607.7-201ENST00000527152 1677 ntBASIC20.24■□□□□ 0.83
BBS4Q96RK4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BBS4Q96RK4 IGHV3-19-201ENST00000521488 291 ntBASIC20.24■□□□□ 0.83
BBS4Q96RK4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.24■□□□□ 0.83
BBS4Q96RK4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
BBS4Q96RK4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BBS4Q96RK4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BBS4Q96RK4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BBS4Q96RK4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.23■□□□□ 0.83
BBS4Q96RK4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.23■□□□□ 0.83
BBS4Q96RK4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
BBS4Q96RK4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.23■□□□□ 0.83
BBS4Q96RK4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BBS4Q96RK4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.23■□□□□ 0.83
BBS4Q96RK4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.23■□□□□ 0.83
BBS4Q96RK4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BBS4Q96RK4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.23■□□□□ 0.83
BBS4Q96RK4 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.23■□□□□ 0.83
BBS4Q96RK4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BBS4Q96RK4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
BBS4Q96RK4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BBS4Q96RK4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.22■□□□□ 0.83
BBS4Q96RK4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BBS4Q96RK4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BBS4Q96RK4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BBS4Q96RK4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
BBS4Q96RK4 AP001330.3-201ENST00000520123 633 ntBASIC20.22■□□□□ 0.83
BBS4Q96RK4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.22■□□□□ 0.83
BBS4Q96RK4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.22■□□□□ 0.83
BBS4Q96RK4 AC133561.4-201ENST00000566112 224 ntBASIC20.22■□□□□ 0.83
BBS4Q96RK4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.22■□□□□ 0.83
BBS4Q96RK4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BBS4Q96RK4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BBS4Q96RK4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BBS4Q96RK4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BBS4Q96RK4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BBS4Q96RK4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.22■□□□□ 0.83
BBS4Q96RK4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.22■□□□□ 0.83
BBS4Q96RK4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
BBS4Q96RK4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BBS4Q96RK4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BBS4Q96RK4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
BBS4Q96RK4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
BBS4Q96RK4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.21■□□□□ 0.83
BBS4Q96RK4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
BBS4Q96RK4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.21■□□□□ 0.83
BBS4Q96RK4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.21■□□□□ 0.83
BBS4Q96RK4 AF213884.3-201ENST00000563833 479 ntBASIC20.21■□□□□ 0.83
BBS4Q96RK4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.21■□□□□ 0.83
BBS4Q96RK4 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.21■□□□□ 0.83
BBS4Q96RK4 AL139246.5-201ENST00000606645 996 ntBASIC20.21■□□□□ 0.83
BBS4Q96RK4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BBS4Q96RK4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BBS4Q96RK4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BBS4Q96RK4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.21■□□□□ 0.83
BBS4Q96RK4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.21■□□□□ 0.83
BBS4Q96RK4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
BBS4Q96RK4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BBS4Q96RK4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BBS4Q96RK4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BBS4Q96RK4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BBS4Q96RK4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms