Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.14■□□□□ 0.66
FOXN4Q96NZ1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
FOXN4Q96NZ1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXN4Q96NZ1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXN4Q96NZ1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
FOXN4Q96NZ1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.14■□□□□ 0.66
FOXN4Q96NZ1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 AL136967.2-201ENST00000623968 743 ntBASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 OR7E47P-201ENST00000546390 1422 ntBASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN4Q96NZ1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 AF213884.3-201ENST00000563833 479 ntBASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 AC136469.2-201ENST00000623944 1028 ntBASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
FOXN4Q96NZ1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 AC026310.3-201ENST00000625186 2373 ntBASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 AL138724.1-201ENST00000606771 1088 ntBASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN4Q96NZ1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 AC010141.3-201ENST00000456659 717 ntBASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 MIR4767-201ENST00000582827 78 ntBASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 AC011298.3-201ENST00000615796 283 ntBASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN4Q96NZ1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 AC087239.1-201ENST00000622671 572 ntBASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms