Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH3Q96II8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH3Q96II8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH3Q96II8 C1QBPP2-201ENST00000528754 825 ntBASIC23.35■■□□□ 1.33
LRCH3Q96II8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.35■■□□□ 1.33
LRCH3Q96II8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.35■■□□□ 1.33
LRCH3Q96II8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.35■■□□□ 1.33
LRCH3Q96II8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.35■■□□□ 1.33
LRCH3Q96II8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH3Q96II8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
LRCH3Q96II8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
LRCH3Q96II8 AC069236.1-201ENST00000604339 616 ntBASIC23.35■■□□□ 1.33
LRCH3Q96II8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH3Q96II8 AC133561.5-201ENST00000635547 218 ntBASIC23.35■■□□□ 1.33
LRCH3Q96II8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH3Q96II8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
LRCH3Q96II8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.35■■□□□ 1.33
LRCH3Q96II8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LRCH3Q96II8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.34■■□□□ 1.33
LRCH3Q96II8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
LRCH3Q96II8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LRCH3Q96II8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.34■■□□□ 1.33
LRCH3Q96II8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
LRCH3Q96II8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LRCH3Q96II8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.34■■□□□ 1.33
LRCH3Q96II8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.34■■□□□ 1.33
LRCH3Q96II8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LRCH3Q96II8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LRCH3Q96II8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
LRCH3Q96II8 AC144652.1-201ENST00000609974 1624 ntBASIC23.33■■□□□ 1.33
LRCH3Q96II8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LRCH3Q96II8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
LRCH3Q96II8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.33■■□□□ 1.33
LRCH3Q96II8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LRCH3Q96II8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
LRCH3Q96II8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LRCH3Q96II8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.33■■□□□ 1.33
LRCH3Q96II8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.33■■□□□ 1.33
LRCH3Q96II8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.33■■□□□ 1.33
LRCH3Q96II8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.33■■□□□ 1.32
LRCH3Q96II8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
LRCH3Q96II8 ARMC10P1-201ENST00000313754 855 ntBASIC23.32■■□□□ 1.32
LRCH3Q96II8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.32■■□□□ 1.32
LRCH3Q96II8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.32■■□□□ 1.32
LRCH3Q96II8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.32■■□□□ 1.32
LRCH3Q96II8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.32■■□□□ 1.32
LRCH3Q96II8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.32■■□□□ 1.32
LRCH3Q96II8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.32■■□□□ 1.32
LRCH3Q96II8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRCH3Q96II8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRCH3Q96II8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRCH3Q96II8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRCH3Q96II8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRCH3Q96II8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LRCH3Q96II8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LRCH3Q96II8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.31■■□□□ 1.32
LRCH3Q96II8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.31■■□□□ 1.32
LRCH3Q96II8 AC010141.2-201ENST00000452426 721 ntBASIC23.31■■□□□ 1.32
LRCH3Q96II8 KRT18P20-201ENST00000548986 1279 ntBASIC23.31■■□□□ 1.32
LRCH3Q96II8 CYP2T3P-201ENST00000601990 817 ntBASIC23.31■■□□□ 1.32
LRCH3Q96II8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.31■■□□□ 1.32
LRCH3Q96II8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
LRCH3Q96II8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRCH3Q96II8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH3Q96II8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH3Q96II8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.3■■□□□ 1.32
LRCH3Q96II8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.3■■□□□ 1.32
LRCH3Q96II8 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.3■■□□□ 1.32
LRCH3Q96II8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.3■■□□□ 1.32
LRCH3Q96II8 AC007322.4-201ENST00000509611 723 ntBASIC23.3■■□□□ 1.32
LRCH3Q96II8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH3Q96II8 AC008403.3-201ENST00000598924 454 ntBASIC23.3■■□□□ 1.32
LRCH3Q96II8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH3Q96II8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH3Q96II8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH3Q96II8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH3Q96II8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH3Q96II8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH3Q96II8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.3■■□□□ 1.32
LRCH3Q96II8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.3■■□□□ 1.32
LRCH3Q96II8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH3Q96II8 HLA-L-211ENST00000482052 1765 ntBASIC23.29■■□□□ 1.32
LRCH3Q96II8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LRCH3Q96II8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LRCH3Q96II8 AC009237.3-201ENST00000393279 1427 ntBASIC23.29■■□□□ 1.32
LRCH3Q96II8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
LRCH3Q96II8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.29■■□□□ 1.32
LRCH3Q96II8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LRCH3Q96II8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.29■■□□□ 1.32
LRCH3Q96II8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.29■■□□□ 1.32
LRCH3Q96II8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.29■■□□□ 1.32
LRCH3Q96II8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.29■■□□□ 1.32
LRCH3Q96II8 OXCT2P1-201ENST00000447263 1535 ntBASIC23.28■■□□□ 1.32
LRCH3Q96II8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRCH3Q96II8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
LRCH3Q96II8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRCH3Q96II8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.28■■□□□ 1.32
LRCH3Q96II8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRCH3Q96II8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.28■■□□□ 1.32
LRCH3Q96II8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms