Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDL1Q96EA4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDL1Q96EA4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDL1Q96EA4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDL1Q96EA4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.96■□□□□ 0.95
SPDL1Q96EA4 FAM99A-202ENST00000538190 1989 ntBASIC20.96■□□□□ 0.95
SPDL1Q96EA4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SPDL1Q96EA4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.96■□□□□ 0.95
SPDL1Q96EA4 AC103834.1-201ENST00000520383 144 ntBASIC20.96■□□□□ 0.95
SPDL1Q96EA4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.96■□□□□ 0.95
SPDL1Q96EA4 AC137630.3-201ENST00000607245 391 ntBASIC20.96■□□□□ 0.95
SPDL1Q96EA4 AC009086.3-201ENST00000623486 1008 ntBASIC20.96■□□□□ 0.95
SPDL1Q96EA4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDL1Q96EA4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPDL1Q96EA4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDL1Q96EA4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPDL1Q96EA4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPDL1Q96EA4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
SPDL1Q96EA4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
SPDL1Q96EA4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 AC103724.3-201ENST00000564481 992 ntBASIC20.95■□□□□ 0.94
SPDL1Q96EA4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDL1Q96EA4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 MIR6722-201ENST00000617286 78 ntBASIC20.94■□□□□ 0.94
SPDL1Q96EA4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.94■□□□□ 0.94
SPDL1Q96EA4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 DUX4L4-201ENST00000566884 1269 ntBASIC20.93■□□□□ 0.94
SPDL1Q96EA4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
SPDL1Q96EA4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDL1Q96EA4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.92■□□□□ 0.94
SPDL1Q96EA4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDL1Q96EA4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDL1Q96EA4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDL1Q96EA4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDL1Q96EA4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.92■□□□□ 0.94
SPDL1Q96EA4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPDL1Q96EA4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDL1Q96EA4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SPDL1Q96EA4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDL1Q96EA4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDL1Q96EA4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms