Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB39BQ96DA2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB39BQ96DA2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB39BQ96DA2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
RAB39BQ96DA2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB39BQ96DA2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RAB39BQ96DA2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.27■□□□□ 0.52
RAB39BQ96DA2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB39BQ96DA2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB39BQ96DA2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
RAB39BQ96DA2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB39BQ96DA2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB39BQ96DA2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RAB39BQ96DA2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RAB39BQ96DA2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RAB39BQ96DA2 LINC00526-201ENST00000581067 1875 ntBASIC18.26■□□□□ 0.51
RAB39BQ96DA2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB39BQ96DA2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 AC127496.7-201ENST00000625110 1798 ntBASIC18.25■□□□□ 0.51
RAB39BQ96DA2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.25■□□□□ 0.51
RAB39BQ96DA2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.25■□□□□ 0.51
RAB39BQ96DA2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB39BQ96DA2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB39BQ96DA2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RAB39BQ96DA2 AC010141.3-201ENST00000456659 717 ntBASIC18.24■□□□□ 0.51
RAB39BQ96DA2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB39BQ96DA2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB39BQ96DA2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB39BQ96DA2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB39BQ96DA2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RAB39BQ96DA2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB39BQ96DA2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RAB39BQ96DA2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB39BQ96DA2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB39BQ96DA2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB39BQ96DA2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.22■□□□□ 0.51
RAB39BQ96DA2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.22■□□□□ 0.51
RAB39BQ96DA2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB39BQ96DA2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB39BQ96DA2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.22■□□□□ 0.51
RAB39BQ96DA2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.22■□□□□ 0.51
RAB39BQ96DA2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.22■□□□□ 0.51
RAB39BQ96DA2 DUX4L2-201ENST00000561772 1275 ntBASIC18.22■□□□□ 0.51
RAB39BQ96DA2 CCDC92B-201ENST00000575506 885 ntBASIC18.22■□□□□ 0.51
RAB39BQ96DA2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
RAB39BQ96DA2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.22■□□□□ 0.51
RAB39BQ96DA2 DUX4L6-201ENST00000626483 1275 ntBASIC18.22■□□□□ 0.51
RAB39BQ96DA2 DUX4L1-201ENST00000627662 1275 ntBASIC18.22■□□□□ 0.51
RAB39BQ96DA2 DUX4L8-201ENST00000629013 1275 ntBASIC18.22■□□□□ 0.51
RAB39BQ96DA2 DUX4L3-201ENST00000630187 1275 ntBASIC18.22■□□□□ 0.51
RAB39BQ96DA2 DUX4L7-201ENST00000630678 1275 ntBASIC18.22■□□□□ 0.51
RAB39BQ96DA2 DUX4L5-201ENST00000630834 1275 ntBASIC18.22■□□□□ 0.51
RAB39BQ96DA2 AL031602.1-201ENST00000633169 911 ntBASIC18.22■□□□□ 0.51
RAB39BQ96DA2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.22■□□□□ 0.51
RAB39BQ96DA2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB39BQ96DA2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RAB39BQ96DA2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RAB39BQ96DA2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms