Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPTSSAQ969W0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SPTSSAQ969W0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.73■□□□□ 0.59
SPTSSAQ969W0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.73■□□□□ 0.59
SPTSSAQ969W0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.73■□□□□ 0.59
SPTSSAQ969W0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
SPTSSAQ969W0 PBX2P1-201ENST00000493219 1291 ntBASIC18.73■□□□□ 0.59
SPTSSAQ969W0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPTSSAQ969W0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPTSSAQ969W0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SPTSSAQ969W0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPTSSAQ969W0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPTSSAQ969W0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SPTSSAQ969W0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPTSSAQ969W0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 AP004607.7-201ENST00000527152 1677 ntBASIC18.71■□□□□ 0.59
SPTSSAQ969W0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 AC104564.3-201ENST00000582367 638 ntBASIC18.71■□□□□ 0.59
SPTSSAQ969W0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 AC244015.2-201ENST00000616358 1861 ntBASIC18.71■□□□□ 0.59
SPTSSAQ969W0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPTSSAQ969W0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SPTSSAQ969W0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 AC106739.1-201ENST00000617035 715 ntBASIC18.7■□□□□ 0.58
SPTSSAQ969W0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTSSAQ969W0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 IGHV3-19-201ENST00000521488 291 ntBASIC18.69■□□□□ 0.58
SPTSSAQ969W0 AC027682.1-201ENST00000562846 899 ntBASIC18.69■□□□□ 0.58
SPTSSAQ969W0 AC008764.7-201ENST00000593779 1081 ntBASIC18.69■□□□□ 0.58
SPTSSAQ969W0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTSSAQ969W0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.68■□□□□ 0.58
SPTSSAQ969W0 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPTSSAQ969W0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms