Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MBD3L1Q8WWY6 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 AL592293.1-201ENST00000502889 1188 ntBASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
MBD3L1Q8WWY6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 ABHD17AP4-201ENST00000411545 909 ntBASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L1Q8WWY6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MBD3L1Q8WWY6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MBD3L1Q8WWY6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MBD3L1Q8WWY6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MBD3L1Q8WWY6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
MBD3L1Q8WWY6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MBD3L1Q8WWY6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MBD3L1Q8WWY6 AC026471.6-201ENST00000622954 1905 ntBASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD3L1Q8WWY6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L1Q8WWY6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms