Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 LINC01023-201ENST00000606054 436 ntBASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 RBM17P2-201ENST00000616397 1405 ntBASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 AC097658.1-201ENST00000475555 843 ntBASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
ALMS1Q8TCU4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 MIR718-201ENST00000390190 70 ntBASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 UBE2SP1-201ENST00000450587 669 ntBASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.63□□□□□ -0.07
ALMS1Q8TCU4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 C1QBPP2-201ENST00000528754 825 ntBASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 AC008403.3-201ENST00000598924 454 ntBASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 AL355472.2-201ENST00000422958 438 ntBASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 AC010331.1-201ENST00000611423 582 ntBASIC14.62□□□□□ -0.07
ALMS1Q8TCU4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 LINC00543-201ENST00000567234 1845 ntBASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 AC145676.1-201ENST00000514988 2004 ntBASIC14.61□□□□□ -0.07
ALMS1Q8TCU4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 AL445228.2-201ENST00000605589 952 ntBASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 AL353803.4-201ENST00000565882 1934 ntBASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ALMS1Q8TCU4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms