Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 AL034346.1-201ENST00000568244 1277 ntBASIC18.59■□□□□ 0.57
LINC01560Q8TB33 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LINC01560Q8TB33 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.58■□□□□ 0.57
LINC01560Q8TB33 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.58■□□□□ 0.57
LINC01560Q8TB33 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LINC01560Q8TB33 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.58■□□□□ 0.57
LINC01560Q8TB33 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.58■□□□□ 0.57
LINC01560Q8TB33 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LINC01560Q8TB33 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC01560Q8TB33 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC01560Q8TB33 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LINC01560Q8TB33 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LINC01560Q8TB33 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC01560Q8TB33 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LINC01560Q8TB33 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LINC01560Q8TB33 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC01560Q8TB33 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.58■□□□□ 0.56
LINC01560Q8TB33 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC01560Q8TB33 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.58■□□□□ 0.56
LINC01560Q8TB33 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
LINC01560Q8TB33 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 AP006587.3-201ENST00000525742 1516 ntBASIC18.56■□□□□ 0.56
LINC01560Q8TB33 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 EEF1DP3-203ENST00000566025 782 ntBASIC18.56■□□□□ 0.56
LINC01560Q8TB33 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01560Q8TB33 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC01560Q8TB33 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01560Q8TB33 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC01560Q8TB33 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC01560Q8TB33 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC01560Q8TB33 TERF1P5-201ENST00000477545 1207 ntBASIC18.55■□□□□ 0.56
LINC01560Q8TB33 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LINC01560Q8TB33 AC133552.2-202ENST00000575694 574 ntBASIC18.55■□□□□ 0.56
LINC01560Q8TB33 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC01560Q8TB33 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LINC01560Q8TB33 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01560Q8TB33 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01560Q8TB33 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01560Q8TB33 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.54■□□□□ 0.56
LINC01560Q8TB33 AC069152.1-201ENST00000438030 544 ntBASIC18.54■□□□□ 0.56
LINC01560Q8TB33 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 AC133041.1-202ENST00000642053 222 ntBASIC18.54■□□□□ 0.56
LINC01560Q8TB33 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC01560Q8TB33 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01560Q8TB33 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01560Q8TB33 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.53■□□□□ 0.56
LINC01560Q8TB33 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01560Q8TB33 MIR4651-201ENST00000582622 73 ntBASIC18.53■□□□□ 0.56
LINC01560Q8TB33 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC01560Q8TB33 AC053503.5-201ENST00000601508 636 ntBASIC18.53■□□□□ 0.56
LINC01560Q8TB33 AC013268.1-206ENST00000638368 961 ntBASIC18.53■□□□□ 0.56
LINC01560Q8TB33 AC112229.1-201ENST00000639295 961 ntBASIC18.53■□□□□ 0.56
LINC01560Q8TB33 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC01560Q8TB33 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms