Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01006Q8NI28 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01006Q8NI28 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01006Q8NI28 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LINC01006Q8NI28 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
LINC01006Q8NI28 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.75■□□□□ 0.27
LINC01006Q8NI28 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01006Q8NI28 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
LINC01006Q8NI28 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.75■□□□□ 0.27
LINC01006Q8NI28 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.75■□□□□ 0.27
LINC01006Q8NI28 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01006Q8NI28 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 AC068338.2-201ENST00000563278 1430 ntBASIC16.74■□□□□ 0.27
LINC01006Q8NI28 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.74■□□□□ 0.27
LINC01006Q8NI28 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01006Q8NI28 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 MIR4758-201ENST00000577688 71 ntBASIC16.73■□□□□ 0.27
LINC01006Q8NI28 MIR4651-201ENST00000582622 73 ntBASIC16.73■□□□□ 0.27
LINC01006Q8NI28 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01006Q8NI28 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 CYP2T1P-201ENST00000432607 1285 ntBASIC16.72■□□□□ 0.27
LINC01006Q8NI28 FAM201B-201ENST00000458407 597 ntBASIC16.72■□□□□ 0.27
LINC01006Q8NI28 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC01006Q8NI28 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 AC007322.4-201ENST00000509611 723 ntBASIC16.71■□□□□ 0.27
LINC01006Q8NI28 AC098934.4-201ENST00000564127 592 ntBASIC16.71■□□□□ 0.27
LINC01006Q8NI28 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 AC066615.1-201ENST00000640911 628 ntBASIC16.71■□□□□ 0.27
LINC01006Q8NI28 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC01006Q8NI28 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LINC01006Q8NI28 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 AC120498.10-201ENST00000621827 505 ntBASIC16.7■□□□□ 0.26
LINC01006Q8NI28 OR10C1-204ENST00000622521 1039 ntBASIC16.7■□□□□ 0.26
LINC01006Q8NI28 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 MKRN4P-201ENST00000444706 1521 ntBASIC16.7■□□□□ 0.26
LINC01006Q8NI28 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01006Q8NI28 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01006Q8NI28 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms