Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NANOGP1Q8N7R0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NANOGP1Q8N7R0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 AL499627.2-201ENST00000606283 725 ntBASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.05■□□□□ 0.64
NANOGP1Q8N7R0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 AC004987.1-201ENST00000428627 508 ntBASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 ATP5G2P3-201ENST00000429083 425 ntBASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 AL031602.1-201ENST00000633169 911 ntBASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NANOGP1Q8N7R0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 OR7E47P-201ENST00000546390 1422 ntBASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 NTF6A-201ENST00000591175 560 ntBASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NANOGP1Q8N7R0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NANOGP1Q8N7R0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NANOGP1Q8N7R0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NANOGP1Q8N7R0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.02■□□□□ 0.64
NANOGP1Q8N7R0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NANOGP1Q8N7R0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NANOGP1Q8N7R0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.02■□□□□ 0.64
NANOGP1Q8N7R0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NANOGP1Q8N7R0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms