Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.42■□□□□ 0.86
COL27A1Q8IZC6 AC093787.1-201ENST00000450396 207 ntBASIC20.42■□□□□ 0.86
COL27A1Q8IZC6 RPS2P52-201ENST00000469610 820 ntBASIC20.42■□□□□ 0.86
COL27A1Q8IZC6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
COL27A1Q8IZC6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
COL27A1Q8IZC6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.42■□□□□ 0.86
COL27A1Q8IZC6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 TERF1P5-201ENST00000477545 1207 ntBASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL27A1Q8IZC6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 AC053503.5-201ENST00000601508 636 ntBASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.4■□□□□ 0.86
COL27A1Q8IZC6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.39■□□□□ 0.86
COL27A1Q8IZC6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL27A1Q8IZC6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.39■□□□□ 0.86
COL27A1Q8IZC6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
COL27A1Q8IZC6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.39■□□□□ 0.86
COL27A1Q8IZC6 OR10C1-204ENST00000622521 1039 ntBASIC20.39■□□□□ 0.86
COL27A1Q8IZC6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.39■□□□□ 0.86
COL27A1Q8IZC6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL27A1Q8IZC6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL27A1Q8IZC6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL27A1Q8IZC6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL27A1Q8IZC6 MIPEPP3-201ENST00000412105 444 ntBASIC20.39■□□□□ 0.85
COL27A1Q8IZC6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL27A1Q8IZC6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
COL27A1Q8IZC6 RARRES2P4-201ENST00000514074 484 ntBASIC20.39■□□□□ 0.85
COL27A1Q8IZC6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
COL27A1Q8IZC6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.39■□□□□ 0.85
COL27A1Q8IZC6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.39■□□□□ 0.85
COL27A1Q8IZC6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.38■□□□□ 0.85
COL27A1Q8IZC6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.38■□□□□ 0.85
COL27A1Q8IZC6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.38■□□□□ 0.85
COL27A1Q8IZC6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL27A1Q8IZC6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL27A1Q8IZC6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.38■□□□□ 0.85
COL27A1Q8IZC6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL27A1Q8IZC6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL27A1Q8IZC6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL27A1Q8IZC6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL27A1Q8IZC6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL27A1Q8IZC6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 AC092118.2-201ENST00000613495 667 ntBASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 PRORSD1P-201ENST00000295112 541 ntBASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL27A1Q8IZC6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL27A1Q8IZC6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL27A1Q8IZC6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL27A1Q8IZC6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.36■□□□□ 0.85
COL27A1Q8IZC6 AL512625.2-201ENST00000417533 625 ntBASIC20.36■□□□□ 0.85
COL27A1Q8IZC6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.36■□□□□ 0.85
COL27A1Q8IZC6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
COL27A1Q8IZC6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL27A1Q8IZC6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms