Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AL109923.1-201ENST00000618799 583 ntBASIC21.82■■□□□ 1.08
CHPFQ8IZ52 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.81■■□□□ 1.08
CHPFQ8IZ52 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.81■■□□□ 1.08
CHPFQ8IZ52 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.81■■□□□ 1.08
CHPFQ8IZ52 AP001160.3-201ENST00000601484 763 ntBASIC21.81■■□□□ 1.08
CHPFQ8IZ52 UBE2DNL-204ENST00000602536 740 ntBASIC21.81■■□□□ 1.08
CHPFQ8IZ52 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.81■■□□□ 1.08
CHPFQ8IZ52 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
CHPFQ8IZ52 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHPFQ8IZ52 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.8■■□□□ 1.08
CHPFQ8IZ52 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.8■■□□□ 1.08
CHPFQ8IZ52 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHPFQ8IZ52 NCF1B-203ENST00000435988 1254 ntBASIC21.8■■□□□ 1.08
CHPFQ8IZ52 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.8■■□□□ 1.08
CHPFQ8IZ52 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.8■■□□□ 1.08
CHPFQ8IZ52 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.8■■□□□ 1.08
CHPFQ8IZ52 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.8■■□□□ 1.08
CHPFQ8IZ52 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHPFQ8IZ52 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 AL355802.2-201ENST00000402069 882 ntBASIC21.79■■□□□ 1.08
CHPFQ8IZ52 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.79■■□□□ 1.08
CHPFQ8IZ52 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.79■■□□□ 1.08
CHPFQ8IZ52 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHPFQ8IZ52 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.78■■□□□ 1.08
CHPFQ8IZ52 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.78■■□□□ 1.08
CHPFQ8IZ52 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.78■■□□□ 1.08
CHPFQ8IZ52 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.78■■□□□ 1.08
CHPFQ8IZ52 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHPFQ8IZ52 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHPFQ8IZ52 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.78■■□□□ 1.08
CHPFQ8IZ52 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHPFQ8IZ52 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHPFQ8IZ52 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHPFQ8IZ52 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.77■■□□□ 1.08
CHPFQ8IZ52 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.77■■□□□ 1.08
CHPFQ8IZ52 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.77■■□□□ 1.08
CHPFQ8IZ52 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHPFQ8IZ52 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHPFQ8IZ52 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHPFQ8IZ52 GPX1P1-201ENST00000388829 606 ntBASIC21.77■■□□□ 1.08
CHPFQ8IZ52 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CHPFQ8IZ52 AL034346.1-201ENST00000568244 1277 ntBASIC21.77■■□□□ 1.08
CHPFQ8IZ52 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.77■■□□□ 1.08
CHPFQ8IZ52 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.77■■□□□ 1.08
CHPFQ8IZ52 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHPFQ8IZ52 LINC00526-201ENST00000581067 1875 ntBASIC21.77■■□□□ 1.08
CHPFQ8IZ52 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
CHPFQ8IZ52 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHPFQ8IZ52 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHPFQ8IZ52 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHPFQ8IZ52 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHPFQ8IZ52 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHPFQ8IZ52 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.76■■□□□ 1.07
CHPFQ8IZ52 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CHPFQ8IZ52 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.76■■□□□ 1.07
CHPFQ8IZ52 AC231657.2-201ENST00000624556 255 ntBASIC21.76■■□□□ 1.07
CHPFQ8IZ52 MYCNOS-205ENST00000641950 531 ntBASIC21.76■■□□□ 1.07
CHPFQ8IZ52 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHPFQ8IZ52 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CHPFQ8IZ52 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHPFQ8IZ52 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 AC079834.2-201ENST00000609776 1949 ntBASIC21.75■■□□□ 1.07
CHPFQ8IZ52 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHPFQ8IZ52 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHPFQ8IZ52 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHPFQ8IZ52 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHPFQ8IZ52 AC007322.1-201ENST00000426983 750 ntBASIC21.74■■□□□ 1.07
CHPFQ8IZ52 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHPFQ8IZ52 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.74■■□□□ 1.07
CHPFQ8IZ52 DUX4L16-201ENST00000555130 1264 ntBASIC21.74■■□□□ 1.07
CHPFQ8IZ52 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.74■■□□□ 1.07
CHPFQ8IZ52 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHPFQ8IZ52 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms