Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DHX40Q8IX18 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.81■■□□□ 1.4
DHX40Q8IX18 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
DHX40Q8IX18 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DHX40Q8IX18 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DHX40Q8IX18 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DHX40Q8IX18 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DHX40Q8IX18 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.81■■□□□ 1.4
DHX40Q8IX18 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.81■■□□□ 1.4
DHX40Q8IX18 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DHX40Q8IX18 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DHX40Q8IX18 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.81■■□□□ 1.4
DHX40Q8IX18 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
DHX40Q8IX18 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.8■■□□□ 1.4
DHX40Q8IX18 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DHX40Q8IX18 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DHX40Q8IX18 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
DHX40Q8IX18 AC006455.2-201ENST00000429931 906 ntBASIC23.8■■□□□ 1.4
DHX40Q8IX18 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.8■■□□□ 1.4
DHX40Q8IX18 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DHX40Q8IX18 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.8■■□□□ 1.4
DHX40Q8IX18 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.8■■□□□ 1.4
DHX40Q8IX18 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DHX40Q8IX18 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
DHX40Q8IX18 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DHX40Q8IX18 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DHX40Q8IX18 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.79■■□□□ 1.4
DHX40Q8IX18 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.79■■□□□ 1.4
DHX40Q8IX18 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DHX40Q8IX18 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.79■■□□□ 1.4
DHX40Q8IX18 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DHX40Q8IX18 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DHX40Q8IX18 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.79■■□□□ 1.4
DHX40Q8IX18 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
DHX40Q8IX18 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DHX40Q8IX18 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.79■■□□□ 1.4
DHX40Q8IX18 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DHX40Q8IX18 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DHX40Q8IX18 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DHX40Q8IX18 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DHX40Q8IX18 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.78■■□□□ 1.4
DHX40Q8IX18 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DHX40Q8IX18 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
DHX40Q8IX18 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DHX40Q8IX18 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
DHX40Q8IX18 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DHX40Q8IX18 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.78■■□□□ 1.4
DHX40Q8IX18 AL117332.1-201ENST00000622628 974 ntBASIC23.78■■□□□ 1.4
DHX40Q8IX18 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DHX40Q8IX18 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DHX40Q8IX18 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
DHX40Q8IX18 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.77■■□□□ 1.4
DHX40Q8IX18 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DHX40Q8IX18 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
DHX40Q8IX18 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DHX40Q8IX18 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.77■■□□□ 1.4
DHX40Q8IX18 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DHX40Q8IX18 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.77■■□□□ 1.4
DHX40Q8IX18 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
DHX40Q8IX18 LINC01006-201ENST00000333319 2292 ntBASIC23.77■■□□□ 1.4
DHX40Q8IX18 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.77■■□□□ 1.4
DHX40Q8IX18 AC019069.1-201ENST00000610008 1333 ntBASIC23.77■■□□□ 1.4
DHX40Q8IX18 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DHX40Q8IX18 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DHX40Q8IX18 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.76■■□□□ 1.39
DHX40Q8IX18 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DHX40Q8IX18 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DHX40Q8IX18 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.76■■□□□ 1.39
DHX40Q8IX18 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
DHX40Q8IX18 pRNA.6-201ENST00000610482 90 ntBASIC23.76■■□□□ 1.39
DHX40Q8IX18 pRNA.5-201ENST00000612139 90 ntBASIC23.76■■□□□ 1.39
DHX40Q8IX18 pRNA.11-201ENST00000618423 90 ntBASIC23.76■■□□□ 1.39
DHX40Q8IX18 pRNA.13-201ENST00000619112 90 ntBASIC23.76■■□□□ 1.39
DHX40Q8IX18 AC241377.3-202ENST00000626088 1088 ntBASIC23.76■■□□□ 1.39
DHX40Q8IX18 AC241585.3-202ENST00000628937 1088 ntBASIC23.76■■□□□ 1.39
DHX40Q8IX18 AC245100.8-202ENST00000629247 1058 ntBASIC23.76■■□□□ 1.39
DHX40Q8IX18 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DHX40Q8IX18 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.76■■□□□ 1.39
DHX40Q8IX18 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.76■■□□□ 1.39
DHX40Q8IX18 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DHX40Q8IX18 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DHX40Q8IX18 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DHX40Q8IX18 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.75■■□□□ 1.39
DHX40Q8IX18 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
DHX40Q8IX18 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.75■■□□□ 1.39
DHX40Q8IX18 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DHX40Q8IX18 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DHX40Q8IX18 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DHX40Q8IX18 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DHX40Q8IX18 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DHX40Q8IX18 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.74■■□□□ 1.39
DHX40Q8IX18 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
DHX40Q8IX18 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DHX40Q8IX18 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
DHX40Q8IX18 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DHX40Q8IX18 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.74■■□□□ 1.39
DHX40Q8IX18 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DHX40Q8IX18 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
DHX40Q8IX18 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.74■■□□□ 1.39
DHX40Q8IX18 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms