Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
RNF135Q8IUD6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF135Q8IUD6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF135Q8IUD6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF135Q8IUD6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RNF135Q8IUD6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF135Q8IUD6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.68■■□□□ 1.22
RNF135Q8IUD6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.68■■□□□ 1.22
RNF135Q8IUD6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF135Q8IUD6 UBE2DNL-204ENST00000602536 740 ntBASIC22.68■■□□□ 1.22
RNF135Q8IUD6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF135Q8IUD6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
RNF135Q8IUD6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF135Q8IUD6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 AL353803.4-201ENST00000565882 1934 ntBASIC22.67■■□□□ 1.22
RNF135Q8IUD6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
RNF135Q8IUD6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
RNF135Q8IUD6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF135Q8IUD6 C9orf163-202ENST00000624034 2573 ntBASIC22.65■■□□□ 1.22
RNF135Q8IUD6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF135Q8IUD6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF135Q8IUD6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF135Q8IUD6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF135Q8IUD6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF135Q8IUD6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF135Q8IUD6 AC133552.2-202ENST00000575694 574 ntBASIC22.65■■□□□ 1.22
RNF135Q8IUD6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RNF135Q8IUD6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RNF135Q8IUD6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RNF135Q8IUD6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.64■■□□□ 1.21
RNF135Q8IUD6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
RNF135Q8IUD6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.64■■□□□ 1.21
RNF135Q8IUD6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.64■■□□□ 1.21
RNF135Q8IUD6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF135Q8IUD6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.64■■□□□ 1.21
RNF135Q8IUD6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RNF135Q8IUD6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 AC068587.7-201ENST00000641602 218 ntBASIC22.63■■□□□ 1.21
RNF135Q8IUD6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF135Q8IUD6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.62■■□□□ 1.21
RNF135Q8IUD6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 DUSP5P2-201ENST00000426873 1033 ntBASIC22.62■■□□□ 1.21
RNF135Q8IUD6 AC098590.1-201ENST00000468126 897 ntBASIC22.62■■□□□ 1.21
RNF135Q8IUD6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 MIR4758-201ENST00000577688 71 ntBASIC22.62■■□□□ 1.21
RNF135Q8IUD6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 AC068473.5-201ENST00000616428 2072 ntBASIC22.62■■□□□ 1.21
RNF135Q8IUD6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.62■■□□□ 1.21
RNF135Q8IUD6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF135Q8IUD6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF135Q8IUD6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF135Q8IUD6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.61■■□□□ 1.21
RNF135Q8IUD6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF135Q8IUD6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms