Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC28Q86X40 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC28Q86X40 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC28Q86X40 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRC28Q86X40 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC28Q86X40 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRC28Q86X40 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC28Q86X40 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC28Q86X40 Z98882.1-201ENST00000622160 2253 ntBASIC18.94■□□□□ 0.62
LRRC28Q86X40 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRC28Q86X40 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LRRC28Q86X40 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC28Q86X40 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC28Q86X40 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC28Q86X40 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC28Q86X40 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRC28Q86X40 AL139246.5-201ENST00000606645 996 ntBASIC18.94■□□□□ 0.62
LRRC28Q86X40 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC28Q86X40 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LRRC28Q86X40 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LRRC28Q86X40 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LRRC28Q86X40 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.93■□□□□ 0.62
LRRC28Q86X40 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRC28Q86X40 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC28Q86X40 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRC28Q86X40 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LRRC28Q86X40 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC28Q86X40 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC28Q86X40 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC28Q86X40 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC28Q86X40 AC096631.2-201ENST00000436136 790 ntBASIC18.92■□□□□ 0.62
LRRC28Q86X40 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC28Q86X40 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC28Q86X40 AC092171.4-201ENST00000609130 632 ntBASIC18.92■□□□□ 0.62
LRRC28Q86X40 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC28Q86X40 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC28Q86X40 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC28Q86X40 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC28Q86X40 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC28Q86X40 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LRRC28Q86X40 LINC01960-201ENST00000563759 1884 ntBASIC18.92■□□□□ 0.62
LRRC28Q86X40 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC28Q86X40 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LRRC28Q86X40 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC28Q86X40 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC28Q86X40 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC28Q86X40 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.91■□□□□ 0.62
LRRC28Q86X40 C17orf82-201ENST00000623772 1530 ntBASIC18.91■□□□□ 0.62
LRRC28Q86X40 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
LRRC28Q86X40 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC28Q86X40 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC28Q86X40 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LRRC28Q86X40 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC28Q86X40 DUX4L19-201ENST00000557448 1267 ntBASIC18.91■□□□□ 0.62
LRRC28Q86X40 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LRRC28Q86X40 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.91■□□□□ 0.62
LRRC28Q86X40 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC28Q86X40 FEM1AP4-201ENST00000443167 1987 ntBASIC18.91■□□□□ 0.62
LRRC28Q86X40 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC28Q86X40 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC28Q86X40 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC28Q86X40 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC28Q86X40 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC28Q86X40 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LRRC28Q86X40 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC28Q86X40 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LRRC28Q86X40 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC28Q86X40 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC28Q86X40 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC28Q86X40 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
LRRC28Q86X40 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LRRC28Q86X40 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC28Q86X40 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LRRC28Q86X40 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRC28Q86X40 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRC28Q86X40 AC110285.6-201ENST00000617652 491 ntBASIC18.9■□□□□ 0.62
LRRC28Q86X40 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LRRC28Q86X40 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC28Q86X40 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
LRRC28Q86X40 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRC28Q86X40 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRRC28Q86X40 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
LRRC28Q86X40 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC28Q86X40 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC28Q86X40 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC28Q86X40 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC28Q86X40 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.89■□□□□ 0.61
LRRC28Q86X40 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms