Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RAI1Q7Z5J4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAI1Q7Z5J4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAI1Q7Z5J4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAI1Q7Z5J4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAI1Q7Z5J4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 KRT18P6-201ENST00000555540 1265 ntBASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 AF201337.1-201ENST00000520239 748 ntBASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 AL034346.1-201ENST00000568244 1277 ntBASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RAI1Q7Z5J4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 AC069152.1-201ENST00000438030 544 ntBASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 MIR4651-201ENST00000582622 73 ntBASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAI1Q7Z5J4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 AC007322.1-201ENST00000426983 750 ntBASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 AL138781.1-201ENST00000566567 1274 ntBASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 SLC29A4P1-201ENST00000398760 971 ntBASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 AC079089.2-201ENST00000531211 1277 ntBASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 AP004607.7-201ENST00000527152 1677 ntBASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAI1Q7Z5J4 C1orf229-201ENST00000623686 2258 ntBASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 AC005181.1-201ENST00000604782 1256 ntBASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI1Q7Z5J4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RAI1Q7Z5J4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.33■□□□□ 0.53
RAI1Q7Z5J4 EEF1DP3-203ENST00000566025 782 ntBASIC18.33■□□□□ 0.53
RAI1Q7Z5J4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAI1Q7Z5J4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAI1Q7Z5J4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAI1Q7Z5J4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.33■□□□□ 0.52
RAI1Q7Z5J4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAI1Q7Z5J4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAI1Q7Z5J4 AC013268.1-206ENST00000638368 961 ntBASIC18.33■□□□□ 0.52
RAI1Q7Z5J4 AC112229.1-201ENST00000639295 961 ntBASIC18.33■□□□□ 0.52
RAI1Q7Z5J4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAI1Q7Z5J4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAI1Q7Z5J4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 CYP2T1P-201ENST00000432607 1285 ntBASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 AC010536.3-201ENST00000620306 533 ntBASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 AP006587.3-201ENST00000525742 1516 ntBASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms