Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 CLDN5-201ENST00000403084 2357 ntBASIC19.7■□□□□ 0.74
ZNF550Q7Z398 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF550Q7Z398 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF550Q7Z398 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ZNF550Q7Z398 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF550Q7Z398 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ZNF550Q7Z398 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF550Q7Z398 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ZNF550Q7Z398 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ZNF550Q7Z398 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF550Q7Z398 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
ZNF550Q7Z398 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ZNF550Q7Z398 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF550Q7Z398 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ZNF550Q7Z398 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF550Q7Z398 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF550Q7Z398 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF550Q7Z398 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF550Q7Z398 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF550Q7Z398 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF550Q7Z398 AC099791.1-201ENST00000416440 715 ntBASIC19.68■□□□□ 0.74
ZNF550Q7Z398 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.68■□□□□ 0.74
ZNF550Q7Z398 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF550Q7Z398 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF550Q7Z398 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF550Q7Z398 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF550Q7Z398 RASA4CP-201ENST00000424092 1398 ntBASIC19.68■□□□□ 0.74
ZNF550Q7Z398 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF550Q7Z398 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF550Q7Z398 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
ZNF550Q7Z398 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF550Q7Z398 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF550Q7Z398 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF550Q7Z398 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF550Q7Z398 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF550Q7Z398 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF550Q7Z398 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF550Q7Z398 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 AC126544.1-201ENST00000580842 1059 ntBASIC19.66■□□□□ 0.74
ZNF550Q7Z398 AC244015.2-201ENST00000616358 1861 ntBASIC19.66■□□□□ 0.74
ZNF550Q7Z398 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF550Q7Z398 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF550Q7Z398 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF550Q7Z398 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF550Q7Z398 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ZNF550Q7Z398 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF550Q7Z398 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF550Q7Z398 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF550Q7Z398 AC026271.2-201ENST00000428091 497 ntBASIC19.65■□□□□ 0.74
ZNF550Q7Z398 AC104564.3-201ENST00000582367 638 ntBASIC19.65■□□□□ 0.74
ZNF550Q7Z398 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF550Q7Z398 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF550Q7Z398 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF550Q7Z398 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF550Q7Z398 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.64■□□□□ 0.74
ZNF550Q7Z398 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF550Q7Z398 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF550Q7Z398 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF550Q7Z398 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF550Q7Z398 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF550Q7Z398 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
ZNF550Q7Z398 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ZNF550Q7Z398 AP004607.7-201ENST00000527152 1677 ntBASIC19.64■□□□□ 0.73
ZNF550Q7Z398 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF550Q7Z398 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF550Q7Z398 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF550Q7Z398 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF550Q7Z398 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF550Q7Z398 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ZNF550Q7Z398 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF550Q7Z398 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms