Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCXQ7RTU7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCXQ7RTU7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCXQ7RTU7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCXQ7RTU7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCXQ7RTU7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCXQ7RTU7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SCXQ7RTU7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.03□□□□□ -0.16
SCXQ7RTU7 KRT18P5-201ENST00000436075 1291 ntBASIC14.03□□□□□ -0.16
SCXQ7RTU7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.03□□□□□ -0.16
SCXQ7RTU7 AC123595.1-201ENST00000440769 1046 ntBASIC14.03□□□□□ -0.16
SCXQ7RTU7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCXQ7RTU7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCXQ7RTU7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SCXQ7RTU7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCXQ7RTU7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
SCXQ7RTU7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.03□□□□□ -0.16
SCXQ7RTU7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC14.03□□□□□ -0.16
SCXQ7RTU7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCXQ7RTU7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCXQ7RTU7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCXQ7RTU7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCXQ7RTU7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCXQ7RTU7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SCXQ7RTU7 AL137060.1-201ENST00000618151 2648 ntBASIC14.02□□□□□ -0.16
SCXQ7RTU7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCXQ7RTU7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCXQ7RTU7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SCXQ7RTU7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.02□□□□□ -0.16
SCXQ7RTU7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCXQ7RTU7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCXQ7RTU7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCXQ7RTU7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCXQ7RTU7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SCXQ7RTU7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SCXQ7RTU7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCXQ7RTU7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCXQ7RTU7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.02□□□□□ -0.17
SCXQ7RTU7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCXQ7RTU7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCXQ7RTU7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC14.02□□□□□ -0.17
SCXQ7RTU7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCXQ7RTU7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 AP005435.1-201ENST00000529293 1178 ntBASIC14.01□□□□□ -0.17
SCXQ7RTU7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SCXQ7RTU7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCXQ7RTU7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC14□□□□□ -0.17
SCXQ7RTU7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SCXQ7RTU7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14□□□□□ -0.17
SCXQ7RTU7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14□□□□□ -0.17
SCXQ7RTU7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
SCXQ7RTU7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14□□□□□ -0.17
SCXQ7RTU7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14□□□□□ -0.17
SCXQ7RTU7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14□□□□□ -0.17
SCXQ7RTU7 CCDC92B-201ENST00000575506 885 ntBASIC14□□□□□ -0.17
SCXQ7RTU7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14□□□□□ -0.17
SCXQ7RTU7 AC022517.1-201ENST00000592429 346 ntBASIC14□□□□□ -0.17
SCXQ7RTU7 AL137784.2-201ENST00000607332 1000 ntBASIC14□□□□□ -0.17
SCXQ7RTU7 IKBKGP1-201ENST00000612193 1073 ntBASIC14□□□□□ -0.17
SCXQ7RTU7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC14□□□□□ -0.17
SCXQ7RTU7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms