Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 HLA-C-202ENST00000376237 1538 nt23.89■■□□□ 1.422e-9■■■■□ 20.1
SND1Q7KZF4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.152e-9■■■■□ 20.1
SND1Q7KZF4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.95■■□□□ 1.12e-9■■■■□ 20.1
SND1Q7KZF4 HLA-C-210ENST00000640219 976 ntBASIC14.13□□□□□ -0.152e-9■■■■□ 20.1
SND1Q7KZF4 NAGPA-204ENST00000562037 615 ntTSL 220.25■□□□□ 0.836e-7■■■■□ 20.1
SND1Q7KZF4 CLSTN3-204ENST00000535313 787 ntTSL 216.68■□□□□ 0.261e-15■■■■□ 20.1
SND1Q7KZF4 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.22□□□□□ -1.251e-323■■■■□ 20.1
SND1Q7KZF4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.68■■□□□ 1.863e-15■■■■□ 20.1
SND1Q7KZF4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.813e-15■■■■□ 20.1
SND1Q7KZF4 BSG-209ENST00000574970 570 ntTSL 422.28■■□□□ 1.166e-54■■■■□ 20.1
SND1Q7KZF4 DDOST-204ENST00000475210 328 ntTSL 210.36□□□□□ -0.758e-12■■■■□ 20.1
SND1Q7KZF4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.045e-8■■■■□ 20.1
SND1Q7KZF4 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.063e-9■■■■□ 20.1
SND1Q7KZF4 SDF2-208ENST00000589788 1342 ntTSL 210.97□□□□□ -0.655e-8■■■■□ 20.1
SND1Q7KZF4 SDF2-209ENST00000591903 735 ntTSL 310.55□□□□□ -0.725e-8■■■■□ 20.1
SND1Q7KZF4 SDF2-203ENST00000585749 823 ntTSL 39.5□□□□□ -0.895e-8■■■■□ 20.1
SND1Q7KZF4 SDF2-207ENST00000588472 681 ntTSL 29.15□□□□□ -0.945e-8■■■■□ 20.1
SND1Q7KZF4 SDF2-210ENST00000592250 1025 ntTSL 28.06□□□□□ -1.125e-8■■■■□ 20.1
SND1Q7KZF4 SDF2-205ENST00000587629 775 ntTSL 36.62□□□□□ -1.355e-8■■■■□ 20.1
SND1Q7KZF4 CD151-215ENST00000529810 608 ntTSL 317.84■□□□□ 0.454e-7■■■■□ 20.1
SND1Q7KZF4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.433e-6■■■■□ 20.1
SND1Q7KZF4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.32■□□□□ 0.682e-7■■■■□ 20.1
SND1Q7KZF4 CRELD2-206ENST00000450207 963 ntTSL 519.07■□□□□ 0.642e-6■■■■□ 20.1
SND1Q7KZF4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.6■□□□□ 0.573e-6■■■■□ 20.1
SND1Q7KZF4 TM2D2-208ENST00000522142 885 ntTSL 318.05■□□□□ 0.482e-7■■■■□ 20.1
SND1Q7KZF4 NDUFS7-207ENST00000538523 931 ntTSL 218.03■□□□□ 0.487e-10■■■■□ 20.1
SND1Q7KZF4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.11■□□□□ 0.337e-10■■■■□ 20.1
SND1Q7KZF4 TM2D2-209ENST00000522434 469 ntTSL 216.91■□□□□ 0.32e-7■■■■□ 20.1
SND1Q7KZF4 NDUFS7-204ENST00000436115 2879 ntTSL 516.87■□□□□ 0.297e-10■■■■□ 20.1
SND1Q7KZF4 NDUFS7-208ENST00000538662 1186 ntTSL 215.75■□□□□ 0.117e-10■■■■□ 20.1
SND1Q7KZF4 NDUFS7-209ENST00000538929 630 ntTSL 415.28■□□□□ 0.047e-10■■■■□ 20.1
SND1Q7KZF4 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.09□□□□□ -0.157e-10■■■■□ 20.1
SND1Q7KZF4 TM2D2-202ENST00000456397 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.352e-7■■■■□ 20.1
SND1Q7KZF4 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC8.35□□□□□ -1.072e-7■■■■□ 20.1
SND1Q7KZF4 TM2D2-207ENST00000521060 284 ntTSL 26.66□□□□□ -1.342e-7■■■■□ 20.1
SND1Q7KZF4 CTSB-223ENST00000532370 693 ntTSL 218■□□□□ 0.477e-34■■■■□ 20.1
SND1Q7KZF4 CTSB-209ENST00000525315 586 ntTSL 213.4□□□□□ -0.267e-34■■■■□ 20.1
SND1Q7KZF4 NAGPA-209ENST00000564922 573 ntTSL 423.1■■□□□ 1.295e-7■■■■□ 20.1
SND1Q7KZF4 NAGPA-217ENST00000591478 408 ntTSL 522.49■■□□□ 1.195e-7■■■■□ 20.1
SND1Q7KZF4 NAGPA-203ENST00000561580 1356 ntTSL 219.32■□□□□ 0.685e-7■■■■□ 20.1
SND1Q7KZF4 SORL1-205ENST00000527649 1765 ntTSL 214.06□□□□□ -0.164e-11■■■■□ 20.1
SND1Q7KZF4 P4HA1-206ENST00000464310 415 ntTSL 57.6□□□□□ -1.193e-8■■■■□ 20.1
SND1Q7KZF4 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.032e-6■■■■□ 20.1
SND1Q7KZF4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.46■□□□□ 0.712e-8■■■■□ 20
SND1Q7KZF4 MOB2-204ENST00000529380 478 ntTSL 416.22■□□□□ 0.193e-6■■■■□ 20
SND1Q7KZF4 MOB2-202ENST00000526462 795 ntTSL 214.01□□□□□ -0.173e-6■■■■□ 20
SND1Q7KZF4 DDOST-203ENST00000464364 502 ntTSL 514.7□□□□□ -0.062e-10■■■■□ 20
SND1Q7KZF4 CD151-216ENST00000530155 493 ntTSL 420.19■□□□□ 0.825e-14■■■■□ 20
SND1Q7KZF4 CD151-206ENST00000525333 561 ntTSL 420.19■□□□□ 0.825e-14■■■■□ 20
SND1Q7KZF4 CD151-214ENST00000528867 545 ntTSL 418.97■□□□□ 0.635e-14■■■■□ 20
SND1Q7KZF4 CD151-207ENST00000525718 565 ntTSL 218.51■□□□□ 0.555e-14■■■■□ 20
SND1Q7KZF4 CD151-219ENST00000531999 580 ntTSL 316.46■□□□□ 0.235e-14■■■■□ 20
SND1Q7KZF4 CD151-208ENST00000525868 541 ntTSL 415.91■□□□□ 0.145e-14■■■■□ 20
SND1Q7KZF4 KRT19-207ENST00000593096 728 ntTSL 316.22■□□□□ 0.196e-9■■■■□ 20
SND1Q7KZF4 KRT19-204ENST00000468880 868 ntTSL 215.84■□□□□ 0.136e-9■■■■□ 20
SND1Q7KZF4 TMEM45B-204ENST00000527754 888 ntTSL 57.75□□□□□ -1.174e-7■■■■□ 20
SND1Q7KZF4 TMED9-205ENST00000510499 821 ntTSL 210.04□□□□□ -0.82e-14■■■■□ 20
SND1Q7KZF4 PIGT-269ENST00000640692 1948 ntTSL 518.94■□□□□ 0.623e-7■■■■□ 20
SND1Q7KZF4 PIGT-222ENST00000638612 2311 ntTSL 518.55■□□□□ 0.563e-7■■■■□ 20
SND1Q7KZF4 PIGT-248ENST00000639783 1691 ntTSL 218.34■□□□□ 0.533e-7■■■■□ 20
SND1Q7KZF4 PIGT-206ENST00000455050 1807 ntTSL 217.99■□□□□ 0.473e-7■■■■□ 20
SND1Q7KZF4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.99■□□□□ 0.473e-7■■■■□ 20
SND1Q7KZF4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.76■□□□□ 0.433e-7■■■■□ 20
SND1Q7KZF4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.72■□□□□ 0.433e-7■■■■□ 20
SND1Q7KZF4 PIGT-228ENST00000638714 1886 ntTSL 517.7■□□□□ 0.423e-7■■■■□ 20
SND1Q7KZF4 PIGT-232ENST00000638938 1985 ntTSL 517.41■□□□□ 0.383e-7■■■■□ 20
SND1Q7KZF4 PIGT-253ENST00000640108 2109 ntTSL 517.32■□□□□ 0.363e-7■■■■□ 20
SND1Q7KZF4 PIGT-224ENST00000638671 1944 ntTSL 217.29■□□□□ 0.363e-7■■■■□ 20
SND1Q7KZF4 PIGT-217ENST00000638445 2088 ntTSL 216.92■□□□□ 0.33e-7■■■■□ 20
SND1Q7KZF4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.82■□□□□ 0.283e-7■■■■□ 20
SND1Q7KZF4 PIGT-252ENST00000640107 2105 ntTSL 516.61■□□□□ 0.253e-7■■■■□ 20
SND1Q7KZF4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.52■□□□□ 0.233e-7■■■■□ 20
SND1Q7KZF4 PIGT-264ENST00000640585 2203 ntTSL 516.18■□□□□ 0.183e-7■■■■□ 20
SND1Q7KZF4 PIGT-256ENST00000640194 1810 ntTSL 516.15■□□□□ 0.183e-7■■■■□ 20
SND1Q7KZF4 PIGT-215ENST00000638387 2170 ntTSL 516.09■□□□□ 0.173e-7■■■■□ 20
SND1Q7KZF4 PIGT-250ENST00000639932 2158 ntTSL 516.09■□□□□ 0.173e-7■■■■□ 20
SND1Q7KZF4 PIGT-271ENST00000640986 2187 ntTSL 216.09■□□□□ 0.173e-7■■■■□ 20
SND1Q7KZF4 PIGT-211ENST00000638246 2032 ntTSL 516.06■□□□□ 0.163e-7■■■■□ 20
SND1Q7KZF4 PIGT-259ENST00000640272 2112 ntTSL 515.91■□□□□ 0.143e-7■■■■□ 20
SND1Q7KZF4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.123e-7■■■■□ 20
SND1Q7KZF4 PIGT-251ENST00000639984 1965 ntTSL 515.69■□□□□ 0.13e-7■■■■□ 20
SND1Q7KZF4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.69■□□□□ 0.13e-7■■■■□ 20
SND1Q7KZF4 PIGT-267ENST00000640666 2502 ntTSL 515.59■□□□□ 0.093e-7■■■■□ 20
SND1Q7KZF4 PIGT-272ENST00000640996 2219 ntTSL 515.52■□□□□ 0.083e-7■■■■□ 20
SND1Q7KZF4 PIGT-245ENST00000639417 880 ntTSL 314.9□□□□□ -0.023e-7■■■■□ 20
SND1Q7KZF4 PIGT-205ENST00000432270 832 ntTSL 314.9□□□□□ -0.023e-7■■■■□ 20
SND1Q7KZF4 PIGT-227ENST00000638710 2327 ntTSL 514.87□□□□□ -0.033e-7■■■■□ 20
SND1Q7KZF4 PIGT-260ENST00000640324 2098 ntTSL 514□□□□□ -0.173e-7■■■■□ 20
SND1Q7KZF4 PIGT-214ENST00000638383 2235 ntTSL 513.91□□□□□ -0.183e-7■■■■□ 20
SND1Q7KZF4 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC13.91□□□□□ -0.183e-7■■■■□ 20
SND1Q7KZF4 PIGT-255ENST00000640175 1429 ntTSL 213.73□□□□□ -0.213e-7■■■■□ 20
SND1Q7KZF4 PIGT-231ENST00000638927 1457 ntTSL 513.7□□□□□ -0.227e-7■■■■□ 20
SND1Q7KZF4 PIGT-261ENST00000640364 2840 ntTSL 513.7□□□□□ -0.223e-7■■■■□ 20
SND1Q7KZF4 PIGT-240ENST00000639239 505 ntTSL 213.63□□□□□ -0.237e-7■■■■□ 20
SND1Q7KZF4 PIGT-213ENST00000638353 970 ntTSL 1 (best)13.6□□□□□ -0.233e-7■■■■□ 20
SND1Q7KZF4 PIGT-244ENST00000639382 1193 ntTSL 1 (best)13.6□□□□□ -0.233e-7■■■■□ 20
SND1Q7KZF4 PIGT-270ENST00000640940 1764 ntTSL 513.12□□□□□ -0.314e-7■■■■□ 20
SND1Q7KZF4 PIGT-234ENST00000638962 2090 ntTSL 513.02□□□□□ -0.334e-7■■■■□ 20
SND1Q7KZF4 PIGT-263ENST00000640549 1437 ntTSL 512.98□□□□□ -0.334e-7■■■■□ 20
SND1Q7KZF4 PIGT-220ENST00000638537 1902 ntTSL 512.78□□□□□ -0.364e-7■■■■□ 20
Retrieved 100 of 13,567 protein–RNA pairs in 110.3 ms