Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTCHD4Q6ZW05 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCHD4Q6ZW05 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PTCHD4Q6ZW05 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTCHD4Q6ZW05 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 AL035685.1-201ENST00000636663 812 ntBASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTCHD4Q6ZW05 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTCHD4Q6ZW05 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.58■□□□□ 0.73
PTCHD4Q6ZW05 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTCHD4Q6ZW05 AL157384.1-201ENST00000445995 2473 ntBASIC19.58■□□□□ 0.73
PTCHD4Q6ZW05 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.58■□□□□ 0.73
PTCHD4Q6ZW05 KRT16P3-201ENST00000439127 1283 ntBASIC19.58■□□□□ 0.72
PTCHD4Q6ZW05 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.58■□□□□ 0.72
PTCHD4Q6ZW05 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.58■□□□□ 0.72
PTCHD4Q6ZW05 AL117332.1-201ENST00000622628 974 ntBASIC19.58■□□□□ 0.72
PTCHD4Q6ZW05 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PTCHD4Q6ZW05 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTCHD4Q6ZW05 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
PTCHD4Q6ZW05 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTCHD4Q6ZW05 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTCHD4Q6ZW05 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTCHD4Q6ZW05 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PTCHD4Q6ZW05 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTCHD4Q6ZW05 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCHD4Q6ZW05 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms