Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTL4Q6ZR62 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTL4Q6ZR62 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20■□□□□ 0.79
RTL4Q6ZR62 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20■□□□□ 0.79
RTL4Q6ZR62 ANKRD20A6P-201ENST00000618763 204 ntBASIC20■□□□□ 0.79
RTL4Q6ZR62 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20■□□□□ 0.79
RTL4Q6ZR62 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RTL4Q6ZR62 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL4Q6ZR62 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RTL4Q6ZR62 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 LINC01960-201ENST00000563759 1884 ntBASIC19.99■□□□□ 0.79
RTL4Q6ZR62 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.99■□□□□ 0.79
RTL4Q6ZR62 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL4Q6ZR62 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 AC034268.1-201ENST00000441047 882 ntBASIC19.98■□□□□ 0.79
RTL4Q6ZR62 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL4Q6ZR62 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
RTL4Q6ZR62 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTL4Q6ZR62 LINC02228-203ENST00000641970 1355 ntBASIC19.97■□□□□ 0.79
RTL4Q6ZR62 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL4Q6ZR62 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.97■□□□□ 0.79
RTL4Q6ZR62 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RTL4Q6ZR62 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.97■□□□□ 0.79
RTL4Q6ZR62 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.97■□□□□ 0.79
RTL4Q6ZR62 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.97■□□□□ 0.79
RTL4Q6ZR62 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.97■□□□□ 0.79
RTL4Q6ZR62 AC137767.1-201ENST00000602918 1920 ntBASIC19.97■□□□□ 0.79
RTL4Q6ZR62 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.97■□□□□ 0.79
RTL4Q6ZR62 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL4Q6ZR62 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 SMUG1P1-201ENST00000590640 811 ntBASIC19.96■□□□□ 0.79
RTL4Q6ZR62 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 AC087742.1-201ENST00000575880 1738 ntBASIC19.96■□□□□ 0.79
RTL4Q6ZR62 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RTL4Q6ZR62 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 AC092053.2-201ENST00000640557 1818 ntBASIC19.95■□□□□ 0.78
RTL4Q6ZR62 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
RTL4Q6ZR62 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
RTL4Q6ZR62 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL4Q6ZR62 AC139530.1-201ENST00000575312 1977 ntBASIC19.94■□□□□ 0.78
RTL4Q6ZR62 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL4Q6ZR62 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms