Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRFN4Q6PJG9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRFN4Q6PJG9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 FBXW4P1-201ENST00000426721 2239 ntBASIC19.19■□□□□ 0.66
LRFN4Q6PJG9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 EDA-201ENST00000338901 1233 ntBASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 AC008764.7-201ENST00000593779 1081 ntBASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 AL139246.5-201ENST00000606645 996 ntBASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 OXCT2P1-201ENST00000447263 1535 ntBASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN4Q6PJG9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN4Q6PJG9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 AC007375.3-201ENST00000600936 2314 ntBASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 AC133561.4-201ENST00000566112 224 ntBASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 AL031432.3-201ENST00000607698 485 ntBASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 AL355001.2-201ENST00000620617 1191 ntBASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN4Q6PJG9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.15■□□□□ 0.66
LRFN4Q6PJG9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN4Q6PJG9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN4Q6PJG9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.15■□□□□ 0.66
LRFN4Q6PJG9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRFN4Q6PJG9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN4Q6PJG9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.15■□□□□ 0.66
LRFN4Q6PJG9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN4Q6PJG9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LRFN4Q6PJG9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRFN4Q6PJG9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN4Q6PJG9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LRFN4Q6PJG9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRFN4Q6PJG9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
LRFN4Q6PJG9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRFN4Q6PJG9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
LRFN4Q6PJG9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LRFN4Q6PJG9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 AC099791.1-201ENST00000416440 715 ntBASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 AP001330.3-201ENST00000520123 633 ntBASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 AC126544.1-201ENST00000580842 1059 ntBASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 OR7E47P-201ENST00000546390 1422 ntBASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRFN4Q6PJG9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms