Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL6Q6ICC9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 HLA-L-209ENST00000420110 1011 ntBASIC19.29■□□□□ 0.68
RTL6Q6ICC9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 BID-214ENST00000617586 542 ntTSL 5 BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 ESRRAP2-201ENST00000418437 1549 ntBASIC19.29■□□□□ 0.68
RTL6Q6ICC9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL6Q6ICC9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
RTL6Q6ICC9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL6Q6ICC9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RTL6Q6ICC9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RTL6Q6ICC9 AC009237.3-201ENST00000393279 1427 ntBASIC19.28■□□□□ 0.68
RTL6Q6ICC9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL6Q6ICC9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RTL6Q6ICC9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.28■□□□□ 0.68
RTL6Q6ICC9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
RTL6Q6ICC9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL6Q6ICC9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.28■□□□□ 0.68
RTL6Q6ICC9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.28■□□□□ 0.68
RTL6Q6ICC9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 LINC01960-201ENST00000563759 1884 ntBASIC19.27■□□□□ 0.68
RTL6Q6ICC9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTL6Q6ICC9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 AC026185.1-201ENST00000445748 174 ntBASIC19.26■□□□□ 0.67
RTL6Q6ICC9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.26■□□□□ 0.67
RTL6Q6ICC9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 AC079089.2-201ENST00000531211 1277 ntBASIC19.25■□□□□ 0.67
RTL6Q6ICC9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.25■□□□□ 0.67
RTL6Q6ICC9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL6Q6ICC9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.24■□□□□ 0.67
RTL6Q6ICC9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.24■□□□□ 0.67
RTL6Q6ICC9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL6Q6ICC9 KRT18P11-201ENST00000435214 1283 ntBASIC19.24■□□□□ 0.67
RTL6Q6ICC9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.24■□□□□ 0.67
RTL6Q6ICC9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RTL6Q6ICC9 AC104187.1-201ENST00000607510 612 ntBASIC19.24■□□□□ 0.67
RTL6Q6ICC9 AC011767.1-201ENST00000617410 1153 ntBASIC19.24■□□□□ 0.67
RTL6Q6ICC9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL6Q6ICC9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.24■□□□□ 0.67
RTL6Q6ICC9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL6Q6ICC9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RTL6Q6ICC9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.23■□□□□ 0.67
RTL6Q6ICC9 KRT87P-202ENST00000534226 1464 ntBASIC19.23■□□□□ 0.67
RTL6Q6ICC9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL6Q6ICC9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL6Q6ICC9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms