Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 AC091305.1-201ENST00000479476 895 ntBASIC16.6■□□□□ 0.25
TM4SF20Q53R12 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 AC139530.1-201ENST00000575312 1977 ntBASIC16.6■□□□□ 0.25
TM4SF20Q53R12 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TM4SF20Q53R12 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM4SF20Q53R12 AC242852.2-201ENST00000615738 1807 ntBASIC16.59■□□□□ 0.25
TM4SF20Q53R12 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TM4SF20Q53R12 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TM4SF20Q53R12 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.58■□□□□ 0.25
TM4SF20Q53R12 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 AC079089.2-201ENST00000531211 1277 ntBASIC16.58■□□□□ 0.24
TM4SF20Q53R12 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 TSPY26P-201ENST00000476365 1326 ntBASIC16.58■□□□□ 0.24
TM4SF20Q53R12 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM4SF20Q53R12 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 EP400NL-214ENST00000641289 2402 ntBASIC16.57■□□□□ 0.24
TM4SF20Q53R12 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 OXCT2P1-201ENST00000447263 1535 ntBASIC16.57■□□□□ 0.24
TM4SF20Q53R12 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 IGHV3-19-201ENST00000521488 291 ntBASIC16.57■□□□□ 0.24
TM4SF20Q53R12 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TM4SF20Q53R12 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM4SF20Q53R12 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TM4SF20Q53R12 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM4SF20Q53R12 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.56■□□□□ 0.24
TM4SF20Q53R12 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.56■□□□□ 0.24
TM4SF20Q53R12 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.56■□□□□ 0.24
TM4SF20Q53R12 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.56■□□□□ 0.24
TM4SF20Q53R12 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TM4SF20Q53R12 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.56■□□□□ 0.24
TM4SF20Q53R12 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.56■□□□□ 0.24
TM4SF20Q53R12 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 LINC00526-201ENST00000581067 1875 ntBASIC16.55■□□□□ 0.24
TM4SF20Q53R12 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms