Protein–RNA interactions for Protein: Q16533

SNAPC1, snRNA-activating protein complex subunit 1, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1Q16533 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.44■□□□□ 0.7
SNAPC1Q16533 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAPC1Q16533 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAPC1Q16533 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAPC1Q16533 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAPC1Q16533 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNAPC1Q16533 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.43■□□□□ 0.7
SNAPC1Q16533 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAPC1Q16533 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAPC1Q16533 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAPC1Q16533 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAPC1Q16533 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SNAPC1Q16533 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAPC1Q16533 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.43■□□□□ 0.7
SNAPC1Q16533 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAPC1Q16533 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAPC1Q16533 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SNAPC1Q16533 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAPC1Q16533 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAPC1Q16533 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNAPC1Q16533 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAPC1Q16533 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.42■□□□□ 0.7
SNAPC1Q16533 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNAPC1Q16533 AC104564.3-201ENST00000582367 638 ntBASIC19.42■□□□□ 0.7
SNAPC1Q16533 AC010997.5-201ENST00000609182 354 ntBASIC19.42■□□□□ 0.7
SNAPC1Q16533 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SNAPC1Q16533 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.42■□□□□ 0.7
SNAPC1Q16533 AC026471.6-201ENST00000622954 1905 ntBASIC19.42■□□□□ 0.7
SNAPC1Q16533 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAPC1Q16533 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNAPC1Q16533 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAPC1Q16533 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNAPC1Q16533 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SNAPC1Q16533 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAPC1Q16533 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SNAPC1Q16533 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SNAPC1Q16533 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SNAPC1Q16533 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SNAPC1Q16533 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNAPC1Q16533 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAPC1Q16533 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAPC1Q16533 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.41■□□□□ 0.7
SNAPC1Q16533 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAPC1Q16533 Z92544.1-202ENST00000571933 1220 ntBASIC19.41■□□□□ 0.7
SNAPC1Q16533 MIR4787-201ENST00000607364 84 ntBASIC19.41■□□□□ 0.7
SNAPC1Q16533 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SNAPC1Q16533 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SNAPC1Q16533 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SNAPC1Q16533 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.41■□□□□ 0.7
SNAPC1Q16533 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.41■□□□□ 0.7
SNAPC1Q16533 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAPC1Q16533 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAPC1Q16533 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
SNAPC1Q16533 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.4■□□□□ 0.7
SNAPC1Q16533 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAPC1Q16533 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SNAPC1Q16533 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
SNAPC1Q16533 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAPC1Q16533 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNAPC1Q16533 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.4■□□□□ 0.7
SNAPC1Q16533 AL031602.1-201ENST00000633169 911 ntBASIC19.4■□□□□ 0.7
SNAPC1Q16533 OR7E47P-201ENST00000546390 1422 ntBASIC19.4■□□□□ 0.7
SNAPC1Q16533 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.4■□□□□ 0.7
SNAPC1Q16533 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAPC1Q16533 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNAPC1Q16533 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAPC1Q16533 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAPC1Q16533 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAPC1Q16533 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.4■□□□□ 0.7
SNAPC1Q16533 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.39■□□□□ 0.7
SNAPC1Q16533 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNAPC1Q16533 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNAPC1Q16533 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAPC1Q16533 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.39■□□□□ 0.69
SNAPC1Q16533 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAPC1Q16533 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SNAPC1Q16533 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.39■□□□□ 0.69
SNAPC1Q16533 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNAPC1Q16533 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.39■□□□□ 0.69
SNAPC1Q16533 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
SNAPC1Q16533 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAPC1Q16533 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAPC1Q16533 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAPC1Q16533 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAPC1Q16533 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.38■□□□□ 0.69
SNAPC1Q16533 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAPC1Q16533 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNAPC1Q16533 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.38■□□□□ 0.69
SNAPC1Q16533 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
SNAPC1Q16533 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.38■□□□□ 0.69
SNAPC1Q16533 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAPC1Q16533 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.38■□□□□ 0.69
SNAPC1Q16533 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.38■□□□□ 0.69
SNAPC1Q16533 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.38■□□□□ 0.69
SNAPC1Q16533 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.38■□□□□ 0.69
SNAPC1Q16533 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAPC1Q16533 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SNAPC1Q16533 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAPC1Q16533 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.37■□□□□ 0.69
SNAPC1Q16533 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms