Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 YDR355CYDR355C 303 nt3.45□□□□□ -1.86
RUP1Q12242 TLG1YDR468C 675 nt3.45□□□□□ -1.86
RUP1Q12242 WBP1YEL002C 1293 nt3.45□□□□□ -1.86
RUP1Q12242 TCA17YEL048C 459 nt3.45□□□□□ -1.86
RUP1Q12242 GTT1YIR038C 705 nt3.45□□□□□ -1.86
RUP1Q12242 HMX1YLR205C 954 nt3.45□□□□□ -1.86
RUP1Q12242 GLO1YML004C 981 nt3.45□□□□□ -1.86
RUP1Q12242 PML39YML107C 1005 nt3.45□□□□□ -1.86
RUP1Q12242 IMD4YML056C 1575 nt3.45□□□□□ -1.86
RUP1Q12242 MIC60YKR016W 1623 nt3.44□□□□□ -1.86
RUP1Q12242 CUE3YGL110C 1875 nt3.44□□□□□ -1.86
RUP1Q12242 CTM1YHR109W 1758 nt3.44□□□□□ -1.86
RUP1Q12242 YIG1YPL201C 1386 nt3.44□□□□□ -1.86
RUP1Q12242 SUP56tL(CAA)A 82 nt3.44□□□□□ -1.86
RUP1Q12242 SUP53tL(CAA)C 82 nt3.44□□□□□ -1.86
RUP1Q12242 tL(CAA)DtL(CAA)D 82 nt3.44□□□□□ -1.86
RUP1Q12242 tL(CAA)G1tL(CAA)G1 82 nt3.44□□□□□ -1.86
RUP1Q12242 SUP54tL(CAA)G2 82 nt3.44□□□□□ -1.86
RUP1Q12242 ECO1YFR027W 846 nt3.44□□□□□ -1.86
RUP1Q12242 tL(CAA)G3tL(CAA)G3 82 nt3.44□□□□□ -1.86
RUP1Q12242 YFR032C-BYFR032C-B 264 nt3.44□□□□□ -1.86
RUP1Q12242 tL(CAA)KtL(CAA)K 82 nt3.44□□□□□ -1.86
RUP1Q12242 tL(CAA)LtL(CAA)L 82 nt3.44□□□□□ -1.86
RUP1Q12242 tL(CAA)MtL(CAA)M 82 nt3.44□□□□□ -1.86
RUP1Q12242 tL(CAA)NtL(CAA)N 82 nt3.44□□□□□ -1.86
RUP1Q12242 YLR290CYLR290C 834 nt3.44□□□□□ -1.86
RUP1Q12242 PLP2YOR281C 861 nt3.44□□□□□ -1.86
RUP1Q12242 PHO88YBR106W 567 nt3.44□□□□□ -1.86
RUP1Q12242 RIB5YBR256C 717 nt3.44□□□□□ -1.86
RUP1Q12242 ERB1YMR049C 2424 nt3.44□□□□□ -1.86
RUP1Q12242 BMS1YPL217C 3552 nt3.44□□□□□ -1.86
RUP1Q12242 PDS1YDR113C 1122 nt3.43□□□□□ -1.86
RUP1Q12242 PLP1YDR183W 693 nt3.43□□□□□ -1.86
RUP1Q12242 BCD1YHR040W 1101 nt3.43□□□□□ -1.86
RUP1Q12242 YAL004WYAL004W 648 nt3.43□□□□□ -1.86
RUP1Q12242 RPS21AYKR057W 264 nt3.43□□□□□ -1.86
RUP1Q12242 ATG34YOL083W 1239 nt3.43□□□□□ -1.86
RUP1Q12242 ICS2YBR157C 768 nt3.43□□□□□ -1.86
RUP1Q12242 THR4YCR053W 1545 nt3.43□□□□□ -1.86
RUP1Q12242 CPA2YJR109C 3357 nt3.43□□□□□ -1.86
RUP1Q12242 YSP2YDR326C 4317 nt3.43□□□□□ -1.86
RUP1Q12242 RNR1YER070W 2667 nt3.42□□□□□ -1.86
RUP1Q12242 TAN1YGL232W 870 nt3.42□□□□□ -1.86
RUP1Q12242 RPS25AYGR027C 327 nt3.42□□□□□ -1.86
RUP1Q12242 FOL2YGR267C 732 nt3.42□□□□□ -1.86
RUP1Q12242 SED5YLR026C 1023 nt3.42□□□□□ -1.86
RUP1Q12242 RPS10AYOR293W 318 nt3.42□□□□□ -1.86
RUP1Q12242 YPR078CYPR078C 1119 nt3.42□□□□□ -1.86
RUP1Q12242 XRN1YGL173C 4587 nt3.42□□□□□ -1.86
RUP1Q12242 SLI1YGR212W 1407 nt3.42□□□□□ -1.86
RUP1Q12242 REB1YBR049C 2433 nt3.42□□□□□ -1.86
RUP1Q12242 IMH1YLR309C 2736 nt3.42□□□□□ -1.86
RUP1Q12242 ISM1YPL040C 3009 nt3.41□□□□□ -1.86
RUP1Q12242 RAD55YDR076W 1221 nt3.41□□□□□ -1.86
RUP1Q12242 PMI40YER003C 1290 nt3.41□□□□□ -1.86
RUP1Q12242 PFS1YHR185C 714 nt3.41□□□□□ -1.86
RUP1Q12242 MAK16YAL025C 921 nt3.41□□□□□ -1.86
RUP1Q12242 CPR8YNR028W 927 nt3.41□□□□□ -1.86
RUP1Q12242 HUB1YNR032C-A 222 nt3.41□□□□□ -1.86
RUP1Q12242 STU2YLR045C 2667 nt3.41□□□□□ -1.86
RUP1Q12242 SNU23YDL098C 585 nt3.4□□□□□ -1.87
RUP1Q12242 DET1YDR051C 1005 nt3.4□□□□□ -1.87
RUP1Q12242 BUD26YDR241W 288 nt3.4□□□□□ -1.87
RUP1Q12242 PHM6YDR281C 315 nt3.4□□□□□ -1.87
RUP1Q12242 YGL006W-AYGL006W-A 111 nt3.4□□□□□ -1.87
RUP1Q12242 KXD1YGL079W 657 nt3.4□□□□□ -1.87
RUP1Q12242 PDX1YGR193C 1233 nt3.4□□□□□ -1.87
RUP1Q12242 GEP4YHR100C 558 nt3.4□□□□□ -1.87
RUP1Q12242 AIM23YJL131C 1071 nt3.4□□□□□ -1.87
RUP1Q12242 TMA19YKL056C 504 nt3.4□□□□□ -1.87
RUP1Q12242 RIB4YOL143C 510 nt3.4□□□□□ -1.87
RUP1Q12242 IRC13YOR235W 315 nt3.4□□□□□ -1.87
RUP1Q12242 DIB1YPR082C 432 nt3.4□□□□□ -1.87
RUP1Q12242 SUP45YBR143C 1314 nt3.4□□□□□ -1.87
RUP1Q12242 MRH4YGL064C 1686 nt3.39□□□□□ -1.87
RUP1Q12242 HEF3YNL014W 3135 nt3.39□□□□□ -1.87
RUP1Q12242 PBI1YPL272C 1554 nt3.39□□□□□ -1.87
RUP1Q12242 GIC2YDR309C 1152 nt3.39□□□□□ -1.87
RUP1Q12242 GLC3YEL011W 2115 nt3.39□□□□□ -1.87
RUP1Q12242 GPP2YER062C 753 nt3.39□□□□□ -1.87
RUP1Q12242 YGL177WYGL177W 348 nt3.39□□□□□ -1.87
RUP1Q12242 RSM26YJR101W 801 nt3.39□□□□□ -1.87
RUP1Q12242 RPF2YKR081C 1035 nt3.39□□□□□ -1.87
RUP1Q12242 YAL064W-BYAL064W-B 381 nt3.39□□□□□ -1.87
RUP1Q12242 YMR310CYMR310C 954 nt3.39□□□□□ -1.87
RUP1Q12242 UFE1YOR075W 1041 nt3.39□□□□□ -1.87
RUP1Q12242 YPL035CYPL035C 348 nt3.39□□□□□ -1.87
RUP1Q12242 YJR061WYJR061W 2808 nt3.38□□□□□ -1.87
RUP1Q12242 STE24YJR117W 1362 nt3.38□□□□□ -1.87
RUP1Q12242 BYE1YKL005C 1785 nt3.38□□□□□ -1.87
RUP1Q12242 ARG5,6YER069W 2592 nt3.38□□□□□ -1.87
RUP1Q12242 SLA1YBL007C 3735 nt3.38□□□□□ -1.87
RUP1Q12242 YDL162CYDL162C 357 nt3.38□□□□□ -1.87
RUP1Q12242 MIG3YER028C 1185 nt3.38□□□□□ -1.87
RUP1Q12242 SCM4YGR049W 564 nt3.38□□□□□ -1.87
RUP1Q12242 BOS1YLR078C 735 nt3.38□□□□□ -1.87
RUP1Q12242 PET20YPL159C 762 nt3.38□□□□□ -1.87
RUP1Q12242 YPR136CYPR136C 513 nt3.38□□□□□ -1.87
RUP1Q12242 MTL1YGR023W 1656 nt3.38□□□□□ -1.87
RUP1Q12242 SMI1YGR229C 1518 nt3.38□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms