Protein–RNA interactions for Protein: Q08471

MSA1, G1-specific transcription factors activator MSA1, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSA1Q08471 NSA2YER126C 786 nt2.72□□□□□ -1.97
MSA1Q08471 tK(UUU)DtK(UUU)D 73 nt2.72□□□□□ -1.97
MSA1Q08471 tK(UUU)G1tK(UUU)G1 73 nt2.72□□□□□ -1.97
MSA1Q08471 tK(UUU)G2tK(UUU)G2 73 nt2.72□□□□□ -1.97
MSA1Q08471 tK(UUU)KtK(UUU)K 73 nt2.72□□□□□ -1.97
MSA1Q08471 tK(UUU)LtK(UUU)L 73 nt2.72□□□□□ -1.97
MSA1Q08471 tK(UUU)OtK(UUU)O 73 nt2.72□□□□□ -1.97
MSA1Q08471 tK(UUU)PtK(UUU)P 73 nt2.72□□□□□ -1.97
MSA1Q08471 ECO1YFR027W 846 nt2.72□□□□□ -1.97
MSA1Q08471 CGR1YGL029W 363 nt2.72□□□□□ -1.97
MSA1Q08471 YPT35YHR105W 645 nt2.72□□□□□ -1.97
MSA1Q08471 RNH203YLR154C 333 nt2.72□□□□□ -1.97
MSA1Q08471 TVP18YMR071C 504 nt2.72□□□□□ -1.97
MSA1Q08471 SPC24YMR117C 642 nt2.72□□□□□ -1.97
MSA1Q08471 YBL081WYBL081W 1107 nt2.72□□□□□ -1.97
MSA1Q08471 VAM10YOR068C 345 nt2.72□□□□□ -1.97
MSA1Q08471 RAS1YOR101W 930 nt2.72□□□□□ -1.97
MSA1Q08471 YOR263CYOR263C 408 nt2.72□□□□□ -1.97
MSA1Q08471 MRPL51YPR100W 423 nt2.72□□□□□ -1.97
MSA1Q08471 YBR137WYBR137W 540 nt2.72□□□□□ -1.97
MSA1Q08471 SHQ1YIL104C 1524 nt2.72□□□□□ -1.97
MSA1Q08471 RAD2YGR258C 3096 nt2.71□□□□□ -1.98
MSA1Q08471 YDL162CYDL162C 357 nt2.71□□□□□ -1.98
MSA1Q08471 NKP1YDR383C 717 nt2.71□□□□□ -1.98
MSA1Q08471 GCD14YJL125C 1152 nt2.71□□□□□ -1.98
MSA1Q08471 MBB1YJL199C 327 nt2.71□□□□□ -1.98
MSA1Q08471 RSM26YJR101W 801 nt2.71□□□□□ -1.98
MSA1Q08471 HRT3YLR097C 1035 nt2.71□□□□□ -1.98
MSA1Q08471 YLR363W-AYLR363W-A 258 nt2.71□□□□□ -1.98
MSA1Q08471 TAF4YMR005W 1167 nt2.71□□□□□ -1.98
MSA1Q08471 RPL13BYMR142C 600 nt2.71□□□□□ -1.98
MSA1Q08471 HHF1YBR009C 312 nt2.71□□□□□ -1.98
MSA1Q08471 YOR082CYOR082C 342 nt2.71□□□□□ -1.98
MSA1Q08471 HNT3YOR258W 654 nt2.71□□□□□ -1.98
MSA1Q08471 YPR108W-AYPR108W-A 213 nt2.71□□□□□ -1.98
MSA1Q08471 BCS1YDR375C 1371 nt2.71□□□□□ -1.98
MSA1Q08471 TRM1YDR120C 1713 nt2.71□□□□□ -1.98
MSA1Q08471 PTM1YKL039W 1572 nt2.7□□□□□ -1.98
MSA1Q08471 NDC80YIL144W 2076 nt2.7□□□□□ -1.98
MSA1Q08471 FAP7YDL166C 594 nt2.7□□□□□ -1.98
MSA1Q08471 YER039C-AYER039C-A 219 nt2.7□□□□□ -1.98
MSA1Q08471 RPS23AYGR118W 438 nt2.7□□□□□ -1.98
MSA1Q08471 MSA2YKR077W 1092 nt2.7□□□□□ -1.98
MSA1Q08471 RIM11YMR139W 1113 nt2.7□□□□□ -1.98
MSA1Q08471 INN1YNL152W 1230 nt2.7□□□□□ -1.98
MSA1Q08471 IAH1YOR126C 717 nt2.7□□□□□ -1.98
MSA1Q08471 RPS23BYPR132W 438 nt2.7□□□□□ -1.98
MSA1Q08471 YEL025CYEL025C 3567 nt2.7□□□□□ -1.98
MSA1Q08471 DSF2YBR007C 2211 nt2.7□□□□□ -1.98
MSA1Q08471 PKH1YDR490C 2301 nt2.7□□□□□ -1.98
MSA1Q08471 MRH1YDR033W 963 nt2.69□□□□□ -1.98
MSA1Q08471 CTH1YDR151C 978 nt2.69□□□□□ -1.98
MSA1Q08471 SPT2YER161C 1002 nt2.69□□□□□ -1.98
MSA1Q08471 MOH1YBL049W 417 nt2.69□□□□□ -1.98
MSA1Q08471 SUR1YPL057C 1149 nt2.69□□□□□ -1.98
MSA1Q08471 TFC1YBR123C 1950 nt2.69□□□□□ -1.98
MSA1Q08471 SSE2YBR169C 2082 nt2.69□□□□□ -1.98
MSA1Q08471 THR4YCR053W 1545 nt2.68□□□□□ -1.98
MSA1Q08471 MDN1YLR106C 14733 nt2.68□□□□□ -1.98
MSA1Q08471 MSR1YHR091C 1932 nt2.68□□□□□ -1.98
MSA1Q08471 MIT1YEL007W 2001 nt2.68□□□□□ -1.98
MSA1Q08471 USE1YGL098W 738 nt2.68□□□□□ -1.98
MSA1Q08471 SAY1YGR263C 1275 nt2.68□□□□□ -1.98
MSA1Q08471 COA4YLR218C 453 nt2.68□□□□□ -1.98
MSA1Q08471 TRI1YMR233W 681 nt2.68□□□□□ -1.98
MSA1Q08471 YMR316C-AYMR316C-A 312 nt2.68□□□□□ -1.98
MSA1Q08471 GIS2YNL255C 462 nt2.68□□□□□ -1.98
MSA1Q08471 MDJ2YNL328C 441 nt2.68□□□□□ -1.98
MSA1Q08471 RPS7AYOR096W 573 nt2.68□□□□□ -1.98
MSA1Q08471 LCB4YOR171C 1875 nt2.68□□□□□ -1.98
MSA1Q08471 MYO5YMR109W 3660 nt2.67□□□□□ -1.98
MSA1Q08471 ECM18YDR125C 1362 nt2.67□□□□□ -1.98
MSA1Q08471 DTD1YDL219W 453 nt2.67□□□□□ -1.98
MSA1Q08471 YDL242WYDL242W 354 nt2.67□□□□□ -1.98
MSA1Q08471 YLR012CYLR012C 300 nt2.67□□□□□ -1.98
MSA1Q08471 YMR141CYMR141C 309 nt2.67□□□□□ -1.98
MSA1Q08471 YPL071CYPL071C 471 nt2.67□□□□□ -1.98
MSA1Q08471 STT4YLR305C 5703 nt2.67□□□□□ -1.98
MSA1Q08471 REG1YDR028C 3045 nt2.67□□□□□ -1.98
MSA1Q08471 VBA4YDR119W 2307 nt2.67□□□□□ -1.98
MSA1Q08471 EXO5YBR163W 1758 nt2.66□□□□□ -1.98
MSA1Q08471 MSH2YOL090W 2895 nt2.66□□□□□ -1.98
MSA1Q08471 YDR290WYDR290W 330 nt2.66□□□□□ -1.98
MSA1Q08471 YEL057CYEL057C 702 nt2.66□□□□□ -1.98
MSA1Q08471 COX23YHR116W 456 nt2.66□□□□□ -1.98
MSA1Q08471 MAK16YAL025C 921 nt2.66□□□□□ -1.98
MSA1Q08471 RPS21AYKR057W 264 nt2.66□□□□□ -1.98
MSA1Q08471 YLR444CYLR444C 303 nt2.66□□□□□ -1.98
MSA1Q08471 RHO5YNL180C 996 nt2.66□□□□□ -1.98
MSA1Q08471 snR11snR11 258 nt2.66□□□□□ -1.98
MSA1Q08471 PIN4YBL051C 2007 nt2.66□□□□□ -1.98
MSA1Q08471 ERG9YHR190W 1335 nt2.66□□□□□ -1.98
MSA1Q08471 VTC4YJL012C 2166 nt2.66□□□□□ -1.98
MSA1Q08471 MSM1YGR171C 1728 nt2.65□□□□□ -1.98
MSA1Q08471 MDV1YJL112W 2145 nt2.65□□□□□ -1.98
MSA1Q08471 PUG1YER185W 912 nt2.65□□□□□ -1.99
MSA1Q08471 YGL082WYGL082W 1146 nt2.65□□□□□ -1.99
MSA1Q08471 RPL1BYGL135W 654 nt2.65□□□□□ -1.99
MSA1Q08471 CFD1YIL003W 882 nt2.65□□□□□ -1.99
MSA1Q08471 IME1YJR094C 1083 nt2.65□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms