Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 PHO5YBR093C 1404 nt3.68□□□□□ -1.82
RPA49Q01080 RAD4YER162C 2265 nt3.68□□□□□ -1.82
RPA49Q01080 TRK1YJL129C 3708 nt3.68□□□□□ -1.82
RPA49Q01080 BCS1YDR375C 1371 nt3.67□□□□□ -1.82
RPA49Q01080 HIM1YDR317W 1245 nt3.67□□□□□ -1.82
RPA49Q01080 CFD1YIL003W 882 nt3.67□□□□□ -1.82
RPA49Q01080 YAL004WYAL004W 648 nt3.67□□□□□ -1.82
RPA49Q01080 YJR128WYJR128W 360 nt3.67□□□□□ -1.82
RPA49Q01080 TRM112YNR046W 408 nt3.67□□□□□ -1.82
RPA49Q01080 YPR136CYPR136C 513 nt3.67□□□□□ -1.82
RPA49Q01080 YBR292CYBR292C 372 nt3.67□□□□□ -1.82
RPA49Q01080 IMD4YML056C 1575 nt3.67□□□□□ -1.82
RPA49Q01080 YTM1YOR272W 1383 nt3.66□□□□□ -1.82
RPA49Q01080 URA2YJL130C 6645 nt3.66□□□□□ -1.82
RPA49Q01080 COX2Q0250 756 nt3.66□□□□□ -1.82
RPA49Q01080 GSP1YLR293C 660 nt3.66□□□□□ -1.82
RPA49Q01080 IMP4YNL075W 873 nt3.66□□□□□ -1.82
RPA49Q01080 RFC3YNL290W 1023 nt3.66□□□□□ -1.82
RPA49Q01080 YOR082CYOR082C 342 nt3.66□□□□□ -1.82
RPA49Q01080 CCL1YPR025C 1182 nt3.66□□□□□ -1.82
RPA49Q01080 DIB1YPR082C 432 nt3.66□□□□□ -1.82
RPA49Q01080 ORC4YPR162C 1590 nt3.66□□□□□ -1.82
RPA49Q01080 YPR003CYPR003C 2265 nt3.65□□□□□ -1.82
RPA49Q01080 RSF2YJR127C 4143 nt3.65□□□□□ -1.82
RPA49Q01080 MDN1YLR106C 14733 nt3.65□□□□□ -1.82
RPA49Q01080 TAF6YGL112C 1551 nt3.65□□□□□ -1.82
RPA49Q01080 YDR340WYDR340W 303 nt3.65□□□□□ -1.83
RPA49Q01080 FMP32YFL046W 624 nt3.65□□□□□ -1.83
RPA49Q01080 RPS25AYGR027C 327 nt3.65□□□□□ -1.83
RPA49Q01080 YGR190CYGR190C 366 nt3.65□□□□□ -1.83
RPA49Q01080 CAP2YIL034C 864 nt3.65□□□□□ -1.83
RPA49Q01080 GCD14YJL125C 1152 nt3.65□□□□□ -1.83
RPA49Q01080 ENT3YJR125C 1227 nt3.65□□□□□ -1.83
RPA49Q01080 RPL22AYLR061W 366 nt3.65□□□□□ -1.83
RPA49Q01080 BOS1YLR078C 735 nt3.65□□□□□ -1.83
RPA49Q01080 IDP2YLR174W 1239 nt3.65□□□□□ -1.83
RPA49Q01080 YLR198CYLR198C 360 nt3.65□□□□□ -1.83
RPA49Q01080 PRM4YPL156C 855 nt3.65□□□□□ -1.83
RPA49Q01080 YPR108W-AYPR108W-A 213 nt3.65□□□□□ -1.83
RPA49Q01080 NEM1YHR004C 1341 nt3.65□□□□□ -1.83
RPA49Q01080 RAD26YJR035W 3258 nt3.64□□□□□ -1.83
RPA49Q01080 YDL199CYDL199C 2064 nt3.64□□□□□ -1.83
RPA49Q01080 TLG1YDR468C 675 nt3.64□□□□□ -1.83
RPA49Q01080 RPF2YKR081C 1035 nt3.64□□□□□ -1.83
RPA49Q01080 GLO1YML004C 981 nt3.64□□□□□ -1.83
RPA49Q01080 SIN4YNL236W 2925 nt3.64□□□□□ -1.83
RPA49Q01080 ERB1YMR049C 2424 nt3.63□□□□□ -1.83
RPA49Q01080 GSC2YGR032W 5688 nt3.63□□□□□ -1.83
RPA49Q01080 YHR202WYHR202W 1809 nt3.63□□□□□ -1.83
RPA49Q01080 MDM10YAL010C 1482 nt3.63□□□□□ -1.83
RPA49Q01080 CPA2YJR109C 3357 nt3.63□□□□□ -1.83
RPA49Q01080 LRS4YDR439W 1044 nt3.63□□□□□ -1.83
RPA49Q01080 TAM41YGR046W 1158 nt3.63□□□□□ -1.83
RPA49Q01080 VPS25YJR102C 609 nt3.63□□□□□ -1.83
RPA49Q01080 YLR290CYLR290C 834 nt3.63□□□□□ -1.83
RPA49Q01080 PET20YPL159C 762 nt3.63□□□□□ -1.83
RPA49Q01080 RIB5YBR256C 717 nt3.63□□□□□ -1.83
RPA49Q01080 SUP45YBR143C 1314 nt3.63□□□□□ -1.83
RPA49Q01080 AKR1YDR264C 2295 nt3.63□□□□□ -1.83
RPA49Q01080 MON1YGL124C 1935 nt3.62□□□□□ -1.83
RPA49Q01080 EBS1YDR206W 2655 nt3.62□□□□□ -1.83
RPA49Q01080 PMI40YER003C 1290 nt3.62□□□□□ -1.83
RPA49Q01080 TAN1YGL232W 870 nt3.62□□□□□ -1.83
RPA49Q01080 TDA10YGR205W 873 nt3.62□□□□□ -1.83
RPA49Q01080 EPT1YHR123W 1176 nt3.62□□□□□ -1.83
RPA49Q01080 GTT2YLL060C 702 nt3.62□□□□□ -1.83
RPA49Q01080 HUB1YNR032C-A 222 nt3.62□□□□□ -1.83
RPA49Q01080 UFE1YOR075W 1041 nt3.62□□□□□ -1.83
RPA49Q01080 RPS10AYOR293W 318 nt3.62□□□□□ -1.83
RPA49Q01080 YNR066CYNR066C 1311 nt3.62□□□□□ -1.83
RPA49Q01080 MIP6YHR015W 1980 nt3.62□□□□□ -1.83
RPA49Q01080 MAK11YKL021C 1407 nt3.61□□□□□ -1.83
RPA49Q01080 SHQ1YIL104C 1524 nt3.61□□□□□ -1.83
RPA49Q01080 NUP159YIL115C 4383 nt3.61□□□□□ -1.83
RPA49Q01080 RRP17YDR412W 708 nt3.61□□□□□ -1.83
RPA49Q01080 MEI4YER044C-A 1227 nt3.61□□□□□ -1.83
RPA49Q01080 PTI1YGR156W 1278 nt3.61□□□□□ -1.83
RPA49Q01080 BCD1YHR040W 1101 nt3.61□□□□□ -1.83
RPA49Q01080 YIL024CYIL024C 570 nt3.61□□□□□ -1.83
RPA49Q01080 POG1YIL122W 1056 nt3.61□□□□□ -1.83
RPA49Q01080 SAM37YMR060C 984 nt3.61□□□□□ -1.83
RPA49Q01080 FYV5YCL058C 459 nt3.61□□□□□ -1.83
RPA49Q01080 RDS2YPL133C 1341 nt3.61□□□□□ -1.83
RPA49Q01080 PMT6YGR199W 2280 nt3.6□□□□□ -1.83
RPA49Q01080 TMA108YIL137C 2841 nt3.6□□□□□ -1.83
RPA49Q01080 RPS29BYDL061C 171 nt3.6□□□□□ -1.83
RPA49Q01080 YFL051CYFL051C 483 nt3.6□□□□□ -1.83
RPA49Q01080 ERJ5YFR041C 888 nt3.6□□□□□ -1.83
RPA49Q01080 CGR1YGL029W 363 nt3.6□□□□□ -1.83
RPA49Q01080 KXD1YGL079W 657 nt3.6□□□□□ -1.83
RPA49Q01080 YIR021W-AYIR021W-A 213 nt3.6□□□□□ -1.83
RPA49Q01080 PSF2YJL072C 642 nt3.6□□□□□ -1.83
RPA49Q01080 MET14YKL001C 609 nt3.6□□□□□ -1.83
RPA49Q01080 ERV41YML067C 1059 nt3.6□□□□□ -1.83
RPA49Q01080 YMR122W-AYMR122W-A 255 nt3.6□□□□□ -1.83
RPA49Q01080 SSU72YNL222W 621 nt3.6□□□□□ -1.83
RPA49Q01080 YOL162WYOL162W 648 nt3.6□□□□□ -1.83
RPA49Q01080 FMP25YLR077W 1752 nt3.6□□□□□ -1.83
RPA49Q01080 HUL5YGL141W 2733 nt3.6□□□□□ -1.83
RPA49Q01080 YGL140CYGL140C 3660 nt3.6□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms