Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.02■□□□□ 0.96
CDKL1Q00532 AC133561.4-201ENST00000566112 224 ntBASIC21.02■□□□□ 0.96
CDKL1Q00532 AC106739.1-201ENST00000617035 715 ntBASIC21.02■□□□□ 0.96
CDKL1Q00532 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CDKL1Q00532 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDKL1Q00532 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.02■□□□□ 0.96
CDKL1Q00532 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDKL1Q00532 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDKL1Q00532 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CDKL1Q00532 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
CDKL1Q00532 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDKL1Q00532 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDKL1Q00532 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL1Q00532 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL1Q00532 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDKL1Q00532 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.01■□□□□ 0.95
CDKL1Q00532 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDKL1Q00532 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.01■□□□□ 0.95
CDKL1Q00532 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.01■□□□□ 0.95
CDKL1Q00532 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.01■□□□□ 0.95
CDKL1Q00532 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL1Q00532 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL1Q00532 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.01■□□□□ 0.95
CDKL1Q00532 AC026310.3-201ENST00000625186 2373 ntBASIC21.01■□□□□ 0.95
CDKL1Q00532 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL1Q00532 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL1Q00532 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL1Q00532 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL1Q00532 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CDKL1Q00532 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21■□□□□ 0.95
CDKL1Q00532 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL1Q00532 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL1Q00532 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21■□□□□ 0.95
CDKL1Q00532 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDKL1Q00532 GOLGA2P6-201ENST00000340929 2049 ntBASIC21■□□□□ 0.95
CDKL1Q00532 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDKL1Q00532 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDKL1Q00532 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL1Q00532 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL1Q00532 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL1Q00532 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL1Q00532 EDA-201ENST00000338901 1233 ntBASIC20.99■□□□□ 0.95
CDKL1Q00532 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.99■□□□□ 0.95
CDKL1Q00532 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.99■□□□□ 0.95
CDKL1Q00532 PBX2P1-201ENST00000493219 1291 ntBASIC20.99■□□□□ 0.95
CDKL1Q00532 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDKL1Q00532 AL034346.1-201ENST00000568244 1277 ntBASIC20.99■□□□□ 0.95
CDKL1Q00532 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.99■□□□□ 0.95
CDKL1Q00532 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL1Q00532 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.99■□□□□ 0.95
CDKL1Q00532 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.99■□□□□ 0.95
CDKL1Q00532 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL1Q00532 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CDKL1Q00532 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CDKL1Q00532 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.99■□□□□ 0.95
CDKL1Q00532 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CDKL1Q00532 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL1Q00532 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CDKL1Q00532 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL1Q00532 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL1Q00532 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL1Q00532 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.98■□□□□ 0.95
CDKL1Q00532 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.98■□□□□ 0.95
CDKL1Q00532 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL1Q00532 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.98■□□□□ 0.95
CDKL1Q00532 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL1Q00532 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL1Q00532 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL1Q00532 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL1Q00532 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL1Q00532 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL1Q00532 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL1Q00532 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.98■□□□□ 0.95
CDKL1Q00532 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CDKL1Q00532 AC010542.4-201ENST00000563151 1910 ntBASIC20.98■□□□□ 0.95
CDKL1Q00532 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKL1Q00532 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL1Q00532 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
CDKL1Q00532 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL1Q00532 IGHV3-19-201ENST00000521488 291 ntBASIC20.97■□□□□ 0.95
CDKL1Q00532 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL1Q00532 AC110285.6-201ENST00000617652 491 ntBASIC20.97■□□□□ 0.95
CDKL1Q00532 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL1Q00532 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.97■□□□□ 0.95
CDKL1Q00532 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL1Q00532 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL1Q00532 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.96■□□□□ 0.95
CDKL1Q00532 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CDKL1Q00532 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL1Q00532 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL1Q00532 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.96■□□□□ 0.95
CDKL1Q00532 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CDKL1Q00532 AC027682.1-201ENST00000562846 899 ntBASIC20.96■□□□□ 0.95
CDKL1Q00532 AC126544.1-201ENST00000580842 1059 ntBASIC20.96■□□□□ 0.95
CDKL1Q00532 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.96■□□□□ 0.95
CDKL1Q00532 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL1Q00532 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.96■□□□□ 0.95
CDKL1Q00532 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.96■□□□□ 0.95
CDKL1Q00532 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL1Q00532 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms