Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RAB38P57729 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB38P57729 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB38P57729 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB38P57729 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB38P57729 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB38P57729 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RAB38P57729 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RAB38P57729 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB38P57729 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB38P57729 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB38P57729 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB38P57729 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RAB38P57729 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB38P57729 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB38P57729 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
RAB38P57729 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB38P57729 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB38P57729 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB38P57729 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB38P57729 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB38P57729 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB38P57729 AC026271.2-201ENST00000428091 497 ntBASIC20.15■□□□□ 0.82
RAB38P57729 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.15■□□□□ 0.82
RAB38P57729 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB38P57729 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB38P57729 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.15■□□□□ 0.82
RAB38P57729 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB38P57729 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB38P57729 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB38P57729 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB38P57729 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
RAB38P57729 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.15■□□□□ 0.82
RAB38P57729 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB38P57729 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB38P57729 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB38P57729 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB38P57729 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
RAB38P57729 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB38P57729 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RAB38P57729 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB38P57729 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB38P57729 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB38P57729 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.14■□□□□ 0.81
RAB38P57729 KRT18P14-201ENST00000534205 1250 ntBASIC20.14■□□□□ 0.81
RAB38P57729 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.14■□□□□ 0.81
RAB38P57729 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.14■□□□□ 0.81
RAB38P57729 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.14■□□□□ 0.81
RAB38P57729 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB38P57729 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RAB38P57729 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB38P57729 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
RAB38P57729 MIR935-201ENST00000401179 91 ntBASIC20.13■□□□□ 0.81
RAB38P57729 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB38P57729 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
RAB38P57729 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB38P57729 AC087623.3-201ENST00000607047 1098 ntBASIC20.13■□□□□ 0.81
RAB38P57729 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB38P57729 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB38P57729 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.12■□□□□ 0.81
RAB38P57729 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB38P57729 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.12■□□□□ 0.81
RAB38P57729 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB38P57729 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
RAB38P57729 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.12■□□□□ 0.81
RAB38P57729 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB38P57729 AC079140.4-201ENST00000507448 529 ntBASIC20.12■□□□□ 0.81
RAB38P57729 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAB38P57729 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.12■□□□□ 0.81
RAB38P57729 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.12■□□□□ 0.81
RAB38P57729 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB38P57729 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RAB38P57729 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB38P57729 AC026471.6-201ENST00000622954 1905 ntBASIC20.12■□□□□ 0.81
RAB38P57729 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB38P57729 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB38P57729 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.11■□□□□ 0.81
RAB38P57729 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.11■□□□□ 0.81
RAB38P57729 AC034268.1-201ENST00000441047 882 ntBASIC20.11■□□□□ 0.81
RAB38P57729 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.11■□□□□ 0.81
RAB38P57729 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB38P57729 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB38P57729 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.11■□□□□ 0.81
RAB38P57729 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RAB38P57729 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB38P57729 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.11■□□□□ 0.81
RAB38P57729 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB38P57729 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB38P57729 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB38P57729 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB38P57729 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.1■□□□□ 0.81
RAB38P57729 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB38P57729 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB38P57729 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.1■□□□□ 0.81
RAB38P57729 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB38P57729 AC079834.2-201ENST00000609776 1949 ntBASIC20.1■□□□□ 0.81
RAB38P57729 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB38P57729 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RAB38P57729 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.1■□□□□ 0.81
RAB38P57729 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms