Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
PDE1AP54750 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDE1AP54750 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDE1AP54750 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.23■■□□□ 1.79
PDE1AP54750 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDE1AP54750 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.23■■□□□ 1.79
PDE1AP54750 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
PDE1AP54750 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PDE1AP54750 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.23■■□□□ 1.79
PDE1AP54750 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDE1AP54750 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PDE1AP54750 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PDE1AP54750 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDE1AP54750 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
PDE1AP54750 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.22■■□□□ 1.79
PDE1AP54750 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDE1AP54750 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.22■■□□□ 1.79
PDE1AP54750 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.22■■□□□ 1.79
PDE1AP54750 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDE1AP54750 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDE1AP54750 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.22■■□□□ 1.79
PDE1AP54750 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.22■■□□□ 1.79
PDE1AP54750 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
PDE1AP54750 AP006587.3-201ENST00000525742 1516 ntBASIC26.22■■□□□ 1.79
PDE1AP54750 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDE1AP54750 AC003102.1-202ENST00000563394 1796 ntBASIC26.22■■□□□ 1.79
PDE1AP54750 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDE1AP54750 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
PDE1AP54750 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDE1AP54750 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDE1AP54750 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDE1AP54750 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC26.21■■□□□ 1.79
PDE1AP54750 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC26.21■■□□□ 1.79
PDE1AP54750 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDE1AP54750 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.21■■□□□ 1.79
PDE1AP54750 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDE1AP54750 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
PDE1AP54750 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.2■■□□□ 1.79
PDE1AP54750 AC026310.3-201ENST00000625186 2373 ntBASIC26.2■■□□□ 1.79
PDE1AP54750 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.79
PDE1AP54750 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
PDE1AP54750 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDE1AP54750 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.2■■□□□ 1.78
PDE1AP54750 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.2■■□□□ 1.78
PDE1AP54750 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
PDE1AP54750 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDE1AP54750 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.2■■□□□ 1.78
PDE1AP54750 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
PDE1AP54750 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDE1AP54750 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDE1AP54750 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.19■■□□□ 1.78
PDE1AP54750 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDE1AP54750 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PDE1AP54750 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDE1AP54750 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.19■■□□□ 1.78
PDE1AP54750 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.19■■□□□ 1.78
PDE1AP54750 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.19■■□□□ 1.78
PDE1AP54750 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDE1AP54750 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.18■■□□□ 1.78
PDE1AP54750 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
PDE1AP54750 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDE1AP54750 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDE1AP54750 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
PDE1AP54750 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.18■■□□□ 1.78
PDE1AP54750 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.18■■□□□ 1.78
PDE1AP54750 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.18■■□□□ 1.78
PDE1AP54750 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDE1AP54750 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDE1AP54750 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
PDE1AP54750 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDE1AP54750 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDE1AP54750 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.17■■□□□ 1.78
PDE1AP54750 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.17■■□□□ 1.78
PDE1AP54750 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.17■■□□□ 1.78
PDE1AP54750 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
PDE1AP54750 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC26.17■■□□□ 1.78
PDE1AP54750 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PDE1AP54750 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDE1AP54750 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDE1AP54750 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PDE1AP54750 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDE1AP54750 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDE1AP54750 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.16■■□□□ 1.78
PDE1AP54750 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDE1AP54750 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PDE1AP54750 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.16■■□□□ 1.78
PDE1AP54750 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.16■■□□□ 1.78
PDE1AP54750 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDE1AP54750 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.16■■□□□ 1.78
PDE1AP54750 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDE1AP54750 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.15■■□□□ 1.78
PDE1AP54750 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PDE1AP54750 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.15■■□□□ 1.78
PDE1AP54750 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDE1AP54750 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDE1AP54750 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.15■■□□□ 1.78
PDE1AP54750 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.15■■□□□ 1.78
PDE1AP54750 AC012414.1-201ENST00000556676 535 ntBASIC26.15■■□□□ 1.78
PDE1AP54750 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.15■■□□□ 1.78
PDE1AP54750 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms