Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 HAP4YKL109W 1665 nt3.19□□□□□ -1.9
YNL040WP53960 DSN1YIR010W 1731 nt3.19□□□□□ -1.9
YNL040WP53960 APA2YDR530C 978 nt3.18□□□□□ -1.9
YNL040WP53960 YFL051CYFL051C 483 nt3.18□□□□□ -1.9
YNL040WP53960 YLR297WYLR297W 390 nt3.18□□□□□ -1.9
YNL040WP53960 ERG2YMR202W 669 nt3.18□□□□□ -1.9
YNL040WP53960 DSS1YMR287C 2910 nt3.18□□□□□ -1.9
YNL040WP53960 YGR117CYGR117C 1431 nt3.18□□□□□ -1.9
YNL040WP53960 GCD6YDR211W 2139 nt3.17□□□□□ -1.9
YNL040WP53960 CPA2YJR109C 3357 nt3.17□□□□□ -1.9
YNL040WP53960 ORC4YPR162C 1590 nt3.17□□□□□ -1.9
YNL040WP53960 TMA108YIL137C 2841 nt3.17□□□□□ -1.9
YNL040WP53960 tF(GAA)DtF(GAA)D 73 nt3.17□□□□□ -1.9
YNL040WP53960 tF(GAA)NtF(GAA)N 73 nt3.17□□□□□ -1.9
YNL040WP53960 YGR026WYGR026W 837 nt3.17□□□□□ -1.9
YNL040WP53960 DIM1YPL266W 957 nt3.17□□□□□ -1.9
YNL040WP53960 MDM1YML104C 3384 nt3.17□□□□□ -1.9
YNL040WP53960 YSP2YDR326C 4317 nt3.17□□□□□ -1.9
YNL040WP53960 STE23YLR389C 3084 nt3.16□□□□□ -1.9
YNL040WP53960 YCL076WYCL076W 744 nt3.16□□□□□ -1.9
YNL040WP53960 BSC2YDR275W 708 nt3.16□□□□□ -1.9
YNL040WP53960 YIR040CYIR040C 333 nt3.16□□□□□ -1.9
YNL040WP53960 RPC37YKR025W 849 nt3.16□□□□□ -1.9
YNL040WP53960 SEC14YMR079W 915 nt3.16□□□□□ -1.9
YNL040WP53960 YBL094CYBL094C 333 nt3.16□□□□□ -1.9
YNL040WP53960 PNT1YOR266W 1272 nt3.16□□□□□ -1.9
YNL040WP53960 YBR242WYBR242W 717 nt3.16□□□□□ -1.9
YNL040WP53960 RPN2YIL075C 2838 nt3.16□□□□□ -1.9
YNL040WP53960 SQS1YNL224C 2304 nt3.16□□□□□ -1.9
YNL040WP53960 UBP14YBR058C 2346 nt3.16□□□□□ -1.9
YNL040WP53960 AEP3YPL005W 1821 nt3.16□□□□□ -1.9
YNL040WP53960 PWP2YCR057C 2772 nt3.16□□□□□ -1.9
YNL040WP53960 SPO14YKR031C 5052 nt3.16□□□□□ -1.9
YNL040WP53960 STT4YLR305C 5703 nt3.15□□□□□ -1.9
YNL040WP53960 WBP1YEL002C 1293 nt3.15□□□□□ -1.91
YNL040WP53960 MRPL49YJL096W 486 nt3.15□□□□□ -1.91
YNL040WP53960 SFH1YLR321C 1281 nt3.15□□□□□ -1.91
YNL040WP53960 YBL039W-BYBL039W-B 180 nt3.15□□□□□ -1.91
YNL040WP53960 YBL065WYBL065W 345 nt3.15□□□□□ -1.91
YNL040WP53960 YSF3YNL138W-A 258 nt3.15□□□□□ -1.91
YNL040WP53960 GPI2YPL076W 843 nt3.15□□□□□ -1.91
YNL040WP53960 TRM1YDR120C 1713 nt3.15□□□□□ -1.91
YNL040WP53960 YLR177WYLR177W 1887 nt3.15□□□□□ -1.91
YNL040WP53960 ERG9YHR190W 1335 nt3.15□□□□□ -1.91
YNL040WP53960 ATG13YPR185W 2217 nt3.15□□□□□ -1.91
YNL040WP53960 POL2YNL262W 6669 nt3.14□□□□□ -1.91
YNL040WP53960 EPL1YFL024C 2499 nt3.14□□□□□ -1.91
YNL040WP53960 PFK26YIL107C 2484 nt3.14□□□□□ -1.91
YNL040WP53960 SDS23YGL056C 1584 nt3.14□□□□□ -1.91
YNL040WP53960 FAA2YER015W 2235 nt3.14□□□□□ -1.91
YNL040WP53960 MRPL6YHR147C 645 nt3.14□□□□□ -1.91
YNL040WP53960 DAL2YIR029W 1032 nt3.14□□□□□ -1.91
YNL040WP53960 SDO1YLR022C 753 nt3.14□□□□□ -1.91
YNL040WP53960 YLR363W-AYLR363W-A 258 nt3.14□□□□□ -1.91
YNL040WP53960 MDJ2YNL328C 441 nt3.14□□□□□ -1.91
YNL040WP53960 RFM1YOR279C 933 nt3.14□□□□□ -1.91
YNL040WP53960 OXR1YPL196W 822 nt3.14□□□□□ -1.91
YNL040WP53960 YKR015CYKR015C 1707 nt3.13□□□□□ -1.91
YNL040WP53960 TAO3YIL129C 7131 nt3.13□□□□□ -1.91
YNL040WP53960 POG1YIL122W 1056 nt3.13□□□□□ -1.91
YNL040WP53960 PET130YJL023C 1044 nt3.13□□□□□ -1.91
YNL040WP53960 REH1YLR387C 1299 nt3.13□□□□□ -1.91
YNL040WP53960 SIL1YOL031C 1266 nt3.13□□□□□ -1.91
YNL040WP53960 HSH49YOR319W 642 nt3.13□□□□□ -1.91
YNL040WP53960 RPS11BYBR048W 471 nt3.13□□□□□ -1.91
YNL040WP53960 SSE2YBR169C 2082 nt3.13□□□□□ -1.91
YNL040WP53960 YLR446WYLR446W 1302 nt3.13□□□□□ -1.91
YNL040WP53960 YDL180WYDL180W 1644 nt3.12□□□□□ -1.91
YNL040WP53960 SYT1YPR095C 3681 nt3.12□□□□□ -1.91
YNL040WP53960 ADH4YGL256W 1149 nt3.12□□□□□ -1.91
YNL040WP53960 THP2YHR167W 786 nt3.12□□□□□ -1.91
YNL040WP53960 MTD1YKR080W 963 nt3.12□□□□□ -1.91
YNL040WP53960 YAL069WYAL069W 315 nt3.12□□□□□ -1.91
YNL040WP53960 APC9YLR102C 798 nt3.12□□□□□ -1.91
YNL040WP53960 SPO20YMR017W 1194 nt3.12□□□□□ -1.91
YNL040WP53960 YMR316C-AYMR316C-A 312 nt3.12□□□□□ -1.91
YNL040WP53960 IAH1YOR126C 717 nt3.12□□□□□ -1.91
YNL040WP53960 USV1YPL230W 1176 nt3.12□□□□□ -1.91
YNL040WP53960 ARO4YBR249C 1113 nt3.12□□□□□ -1.91
YNL040WP53960 HEH2YDR458C 1992 nt3.11□□□□□ -1.91
YNL040WP53960 PPH3YDR075W 927 nt3.11□□□□□ -1.91
YNL040WP53960 SEM1YDR363W-A 270 nt3.11□□□□□ -1.91
YNL040WP53960 YGR107WYGR107W 450 nt3.11□□□□□ -1.91
YNL040WP53960 YIL025CYIL025C 375 nt3.11□□□□□ -1.91
YNL040WP53960 YMR075C-AYMR075C-A 366 nt3.11□□□□□ -1.91
YNL040WP53960 MRPS17YMR188C 714 nt3.11□□□□□ -1.91
YNL040WP53960 YBR096WYBR096W 693 nt3.11□□□□□ -1.91
YNL040WP53960 RIB5YBR256C 717 nt3.11□□□□□ -1.91
YNL040WP53960 PST1YDR055W 1335 nt3.11□□□□□ -1.91
YNL040WP53960 YLR278CYLR278C 4026 nt3.11□□□□□ -1.91
YNL040WP53960 RGC1YPR115W 3252 nt3.11□□□□□ -1.91
YNL040WP53960 PMR1YGL167C 2853 nt3.1□□□□□ -1.91
YNL040WP53960 JIP5YPR169W 1479 nt3.1□□□□□ -1.91
YNL040WP53960 ENA2YDR039C 3276 nt3.1□□□□□ -1.91
YNL040WP53960 ENA1YDR040C 3276 nt3.1□□□□□ -1.91
YNL040WP53960 YDL026WYDL026W 312 nt3.1□□□□□ -1.91
YNL040WP53960 GRX3YDR098C 858 nt3.1□□□□□ -1.91
YNL040WP53960 YDR290WYDR290W 330 nt3.1□□□□□ -1.91
YNL040WP53960 IRC18YJL037W 675 nt3.1□□□□□ -1.91
YNL040WP53960 PIR1YKL164C 1026 nt3.1□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms